CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P33530_001	Banana	plastid	29.17	29.22
CDX72647	Canola	mitochondrion	8.5	8.64
CDX69319	Canola	plastid	7.5	7.31
CDX75668	Canola	mitochondrion, plastid	7.17	7.0
PGSC0003DMT400023399	Potato	plastid	7.0	6.97
Solyc03g043950.2.1	Tomato	plastid	6.83	6.8
KRH04408	Soybean	plastid	5.33	5.32

Protein Annotations

KEGG:00220+2.3.1.1	Gene3D:3.40.630.30	MapMan:4.1.1.1.1.1	GO:A0A078GWS1	UniProt:A0A078GWS1	InterPro:AceGlu_kinase-like_sf
InterPro:Acyl_CoA_acyltransferase	InterPro:Asp/Glu/Uridylate_kinase	EnsemblPlants:CDY29574	ProteinID:CDY29574	ProteinID:CDY29574.1	InterPro:GNAT_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004042	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006526	GO:GO:0008080	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00043298001	InterPro:IPR000182	InterPro:IPR036393	HAMAP:MF_01105
InterPro:NAGS_kin	InterPro:NH2A_AcTrfase	PFAM:PF00583	PFAM:PF00696	PFscan:PS51186	PANTHER:PTHR30602
PANTHER:PTHR30602:SF4	MetaCyc:PWY-5154	SUPFAM:SSF53633	SUPFAM:SSF55729	TIGRFAMs:TIGR01890	UniPathway:UPA00068
UniParc:UPI0004EEB102	SEG:seg	:	:	:	:

Description

BnaA03g54190DBnaA03g54190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWS1]

Coordinates

chrLK032239:-:369441..371830

Molecular Weight (calculated)

65384.1 Da

IEP (calculated)

6.829

GRAVY (calculated)

-0.140

Length

600 amino acids

Sequence
(BLAST)

001: MEQGALLRSA SSSSNTYYLS YQSRQTRKDL SSFRPENKLN PGQIRFSSPW FKPVGSVAAK CNTYTYAASG GGDAEAEHPV DDKEFVRWFR EAWPYLWAHG
101: GCTFVVVISG DILAGPYCDP ILKDIAFLHH LGIRFVLVPG TQVQIDQLLS ERGREATYVG RYRVTDPASL QAATEAAGAI SVMLEAKLSP GPSICNIRRH
201: GDSSRLHDIG VRVDTGNFFA AKRRGVVDGV DFGATGEVKK IDVDRICERL DGGSVVLLRN LGHSSSGEVL NCNTYEVATA CALAIGADKL ICIMDGPILD
301: ESGHLIRFLT LQEADMLVRK RAQQSDIAAN YVKAVGDGSM AYQEPPGNGR AAFWGNGNHT PIFQNGVGFD IGSGLGSGEQ GFAIGGEERL SRQNGYLSEL
401: AAAAFVCRGG VKRVHLLDGT ITGVLLLELF KRDGMGTMVA SDVYEGTRDA KVDDLAGIRR IIKPLEEGGI LVRRTDEELL QALDSFVVVE REGQIIACAA
501: LFPFFQDKCG EVAAIAVASD CRGQGQGDKL LDYIEKKASS LGLDTLFLLT TRTADWFVRR GFQECAIEVI PETRRQRINL SRKSKYYMKR LLPDKSGISI

Best Arabidopsis Sequence Match ( AT4G37670.2 )
(BLAST)

001: MERGALVGSS STSSYYVPYH FRQSKSNFSS FKPKNKLNPT QFRFNCSWFK PVSSITAAKC NMFDYAVTAA GDVEAEHPVD DKQFVRWFRE AWPYLWAHRG
101: CTFVVIISGE IIAGSSCDAI LKDIAFLHHL GIRFVLVPGT QEQIDQLLAE RGREATYVGR YRVTDAASLQ AAKEAAGAIS VMLEAKLSPG PSICNIRRHG
201: DRSRLHDIGV RVDTGNFFAA KRRGVVDGVD FGATGEVKKI DVDRICERLD GGSVVLLRNL GHSSSGEVLN CNTYEVATAC ALAIGADKLI CIMDGPILDE
301: SGHLIHFLTL QEADMLVRKR AQQSDIAANY VKAVGDGSMA YPEPPNNTNG NITSAQNGRA VSFWGNGNHT PIFQNGVGFD NGNGLWPCEQ GFAIGGEERL
401: SRLNGYLSEL AAAAFVCRGG VKRVHLLDGT ISGVLLLELF KRDGMGTMVA SDVYEGTRDA RVEDLAGIRH IIKPLEESGI LVRRTDEELL RALDSFVVVE
501: REGQIIACAA LFPFFKDKCG EVAAIAVASD CRGQGQGDKL LDYIEKKASS LGLEKLFLLT TRTADWFVRR GFQECSIEII PESRRQRINL SRNSKYYMKK
601: LIPDRSGISV MRI

Arabidopsis Description

NAGS2NAGS2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1D0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.