CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91803
KRH34983
KRH34984

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22910.1	KRG91803	AT1G35670.1	19130088
AT2G22910.1	KRH34983	AT1G35670.1	19130088
AT2G22910.1	KRH34984	AT1G35670.1	19130088
AT2G22910.1	KRG91803	AT4G09570.1	19130088
AT2G22910.1	KRH34983	AT4G09570.1	19130088
AT2G22910.1	KRH34984	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77140	Soybean	plastid	82.54	82.81
AT2G22910.1	Thale cress	cytosol	36.74	36.62
Bra011778.1-P	Field mustard	mitochondrion, plastid	36.24	35.83
CDX75668	Canola	mitochondrion, plastid	36.24	35.83
CDX69319	Canola	plastid	36.24	35.71
AT4G37670.2	Thale cress	plastid	35.58	35.24
KRH58132	Soybean	cytosol	4.45	7.67
PGSC0003DMT400023399	Potato	plastid	7.25	7.3
Solyc03g043950.2.1	Tomato	plastid	7.25	7.3
KRH04408	Soybean	plastid	6.1	6.16
Zm00001d048574_P001	Maize	plastid	4.12	3.45
HORVU3Hr1G070270.2	Barley	cytosol	2.14	2.96
TraesCS7D01G240100.2	Wheat	mitochondrion, plastid	2.64	2.66
TraesCS7B01G136600.1	Wheat	plastid	2.64	2.62
EER94644	Sorghum	plastid	2.47	2.48
KRH58131	Soybean	extracellular	0.16	0.37

Protein Annotations

KEGG:00220+2.3.1.1	Gene3D:3.40.630.30	MapMan:4.1.1.1.1.1	EMBL:ACUP02006746	InterPro:AceGlu_kinase-like_sf	InterPro:Acyl_CoA_acyltransferase
InterPro:Asp/Glu/Uridylate_kinase	EnsemblPlantsGene:GLYMA_11G047200	InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004042
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006526	GO:GO:0008080
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	InterPro:IPR000182
InterPro:IPR036393	UniProt:K7LN31	EnsemblPlants:KRH28345	ProteinID:KRH28345	ProteinID:KRH28345.1	HAMAP:MF_01105
InterPro:NAGS_kin	InterPro:NH2A_AcTrfase	PFAM:PF00583	PFAM:PF00696	PFscan:PS51186	PANTHER:PTHR30602
PANTHER:PTHR30602:SF4	MetaCyc:PWY-5154	SUPFAM:SSF53633	SUPFAM:SSF55729	TIGRFAMs:TIGR01890	UniParc:UPI000233CE56

Description

hypothetical protein

Coordinates

chr11:+:3529131..3534650

Molecular Weight (calculated)

66507.9 Da

IEP (calculated)

7.339

GRAVY (calculated)

-0.127

Length

607 amino acids

Sequence
(BLAST)

001: MARSLCLSLP NTSGTLSDFN KLYSSSHSHH LPKPNLQFNS SWGPEVRPVT AAHLGNRKKL NALSEDGESS YHGSMEDKQF VRSFREAWPY LWAYRGSTFV
101: VIISGEIVSG PFLDVILKDI AFLNHLGIRF VLVPGTHVQI DKLLNERGCQ PMYVGRYRIT DDESLEAAME AAGGIRLMIE AKLSPGPSIC NIRRHGDNSR
201: WHEVGVSVAS GNFLAAKRRG VVNGIDFGST GEVKKVDVTR MRERLDGGCV VVLTNLGYSS SGEVLNCNTY EVATACALAI GADKLICIID GPILDESGHL
301: IRFLPLQEAD MLIRKRAKQS DAAANYVKAV DEEGFNSLEC NNFNGTVKSP PIGCFTEWHN ATFHNGVGFE NGNGLGSGEQ GFAIGGQERL SRMNGYLSEL
401: AAAAFVCRGG VQRVHLLDGT ISGVLLLELF KRDGMGTMVA SDLYEGTRTA EVKDISGIKQ LIHPLEASGI LVKRTDEELL KTLDSFVVVE REGHIIACAA
501: IFPHFEEKCG EVACIAVSPD CRGQGQGDKL LDYMEKKASS LGFNMLFLLT TRTADWFVRR GFSECSIDYI PEKKRRMINL SRNSKYYMKK LLPNISGITV
601: GVKSASS

Best Arabidopsis Sequence Match ( AT4G37670.2 )
(BLAST)

001: MERGALVGSS STSSYYVPYH FRQSKSNFSS FKPKNKLNPT QFRFNCSWFK PVSSITAAKC NMFDYAVTAA GDVEAEHPVD DKQFVRWFRE AWPYLWAHRG
101: CTFVVIISGE IIAGSSCDAI LKDIAFLHHL GIRFVLVPGT QEQIDQLLAE RGREATYVGR YRVTDAASLQ AAKEAAGAIS VMLEAKLSPG PSICNIRRHG
201: DRSRLHDIGV RVDTGNFFAA KRRGVVDGVD FGATGEVKKI DVDRICERLD GGSVVLLRNL GHSSSGEVLN CNTYEVATAC ALAIGADKLI CIMDGPILDE
301: SGHLIHFLTL QEADMLVRKR AQQSDIAANY VKAVGDGSMA YPEPPNNTNG NITSAQNGRA VSFWGNGNHT PIFQNGVGFD NGNGLWPCEQ GFAIGGEERL
401: SRLNGYLSEL AAAAFVCRGG VKRVHLLDGT ISGVLLLELF KRDGMGTMVA SDVYEGTRDA RVEDLAGIRH IIKPLEESGI LVRRTDEELL RALDSFVVVE
501: REGQIIACAA LFPFFKDKCG EVAAIAVASD CRGQGQGDKL LDYIEKKASS LGLEKLFLLT TRTADWFVRR GFQECSIEII PESRRQRINL SRNSKYYMKK
601: LIPDRSGISV MRI

Arabidopsis Description

NAGS2NAGS2 [Source:UniProtKB/TrEMBL;Acc:A0A178V1D0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.