CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 2
peroxisome 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, peroxisome, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	peroxisome
TargetP:	secretory
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G035970.1	Barley	mitochondrion, plastid	1.87	0.86
Os03t0431200-00	Rice	cytosol, mitochondrion, plastid	1.5	0.79
TraesCS2D01G196900.1	Wheat	mitochondrion, plastid	1.5	0.69
TraesCS2A01G191100.1	Wheat	mitochondrion, plastid	1.5	0.69
TraesCS2B01G215900.1	Wheat	mitochondrion, plastid	1.5	0.69
TraesCS7A01G241100.3	Wheat	plastid	1.5	0.68
Solyc02g092260.2.1	Tomato	nucleus	1.12	0.51
PGSC0003DMT400055176	Potato	plastid	1.12	0.51
EER99616	Sorghum	plastid	1.12	0.48
Os07t0585600-01	Rice	cytosol	0.75	0.38
Zm00001d021956_P002	Maize	plastid	0.75	0.33
KRH04408	Soybean	plastid	0.37	0.17
KRH77140	Soybean	plastid	0.37	0.17
KRH28345	Soybean	plastid	0.37	0.16
KRH58132	Soybean	cytosol	0.0	0.0
VIT_00s0670g00020.t01	Wine grape	plastid	0.0	0.0
VIT_00s0823g00020.t01	Wine grape	plastid	0.0	0.0
Zm00001d010837_P001	Maize	plastid	0.0	0.0
Zm00001d047817_P001	Maize	cytosol	0.0	0.0

Protein Annotations

KEGG:00220+2.3.1.1	Gene3D:3.40.1160.10	Gene3D:3.40.630.30	MapMan:4.1.1.1.1.1	UniProt:A0A0R0K0F5	EMBL:ACUP02003202
InterPro:AceGlu_kinase-like_sf	InterPro:Acyl_CoA_acyltransferase	EnsemblPlantsGene:GLYMA_05G106200	InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004042	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006526
GO:GO:0008080	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
InterPro:IPR000182	InterPro:IPR036393	EnsemblPlants:KRH58131	ProteinID:KRH58131	ProteinID:KRH58131.1	InterPro:NH2A_AcTrfase
PFAM:PF00583	PFscan:PS51186	PANTHER:PTHR30602	PANTHER:PTHR30602:SF4	MetaCyc:PWY-5154	SUPFAM:SSF53633
SUPFAM:SSF55729	UniParc:UPI0006EDA34C	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:28299700..28302497

Molecular Weight (calculated)

29892.3 Da

IEP (calculated)

8.168

GRAVY (calculated)

-0.040

Length

267 amino acids

Sequence
(BLAST)

001: LYLPLSSHCL RWFFHYTVCI PAGIHVSGNK HLLCAQSCRS GYRIHENLRC AIMVKAVHEH LMLHEQTESG LKFSISSQIT RRRVKYSATE SEPCFIVDAS
101: CWRSGIRRRS PCEYRDFKSR KISSALSIQS ILCSMEGGVQ RVHLLDGTIS GVLLLELFKR DGMGTMVASD LYEGTRMAQV TDFSGIKKLI QPFEESGILL
201: LQSLGSFIVV EREGQIIACA ALFPFFEEKC GEVAAIAVSP DCRGQGQGDK LLGYENIFDS KQDRSKL

Best Arabidopsis Sequence Match ( AT2G22910.1 )
(BLAST)

001: MTERGAMVVS SSTCYVPFRC PQARKDFAFV EPSKKLNPNR VLIKPPVYTY SPALTAAKCN IFDYAETGEN LVGDKQFVRW FREAWPYLWA HRSCTFVVTI
101: SGDVLDGPYC DLVLKDIAFL HHLGIKFVLV PGTQVQIDQL LAERGREPTY VGRYRVTDSA SLQAAKEAAG AISVMIEAKL SPGPSIYNIR RHGDSSRLHE
201: TGVRVDTGNF FAAKRRGVVD GVDFGATGLV KKIDVDRIRE RLDSGSVVLL RNLGHSSTGE VLNCNTYEVA TACALAIGAD KLICIMDGPV LDENGHLVRF
301: LTLQEADTLV RKRAQQSEIA ANYVKAVGDG GISSFPEPLG YNGMVTTPNN HIGRPIWEKL SPTFQNGVGF DNGNGLWSGE QGFAIGGEER ISRLNGYLSE
401: LAAAAFVCRG GVKRVHLLDG TISGVLLLEL FKRDGMGTMV ASDVYEGNRE AKVEDLAGIR QIIKPLEESG ALVRRTDEEL LRALDSFVVV EREGHIIACA
501: ALFPFFEEKC GEVAAIAVAS DCRGQGQGDK LLDYIEKKAS ALGLEMLFLL TTRTADWFVR RGFQECPIEM IPEARRERIN LSRRSKYYMK KLLPDRSGIS
601: VVRTFQYDS

Arabidopsis Description

NAGS1Probable amino-acid acetyltransferase NAGS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84JF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.