CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047817_P001	Maize	cytosol	46.08	82.29
Zm00001d021956_P002	Maize	plastid	75.68	77.41
Zm00001d010837_P001	Maize	plastid	40.32	48.0
Os07t0585600-01	Rice	cytosol	8.16	9.57
TraesCS7A01G241100.3	Wheat	plastid	6.24	6.67
TraesCS2A01G191100.1	Wheat	mitochondrion, plastid	5.92	6.37
TraesCS2B01G215900.1	Wheat	mitochondrion, plastid	5.92	6.36
HORVU2Hr1G035970.1	Barley	mitochondrion, plastid	5.76	6.19
TraesCS2D01G196900.1	Wheat	mitochondrion, plastid	5.44	5.86
Os03t0431200-00	Rice	cytosol, mitochondrion, plastid	4.0	4.93
EER94644	Sorghum	plastid	3.04	3.14
KRH58132	Soybean	cytosol	1.76	3.12
VIT_00s0670g00020.t01	Wine grape	plastid	1.6	2.41
VIT_00s0823g00020.t01	Wine grape	plastid	1.76	2.36
PGSC0003DMT400055176	Potato	plastid	1.6	1.68
Solyc02g092260.2.1	Tomato	nucleus	1.6	1.68
KRH58131	Soybean	extracellular	0.48	1.12

Protein Annotations

KEGG:00220+2.3.1.1	Gene3D:3.40.1160.10	Gene3D:3.40.630.30	MapMan:4.1.1.1.1.1	EntrezGene:8078969	InterPro:AceGlu_kinase-like_sf
InterPro:Acyl_CoA_acyltransferase	InterPro:Asp/Glu/Uridylate_kinase	UniProt:C5XD16	EnsemblPlants:EER99616	ProteinID:EER99616	ProteinID:EER99616.1
InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004042	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006526	GO:GO:0008080	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	InterPro:IPR000182	InterPro:IPR036393	HAMAP:MF_01105
InterPro:NAGS_kin	InterPro:NH2A_AcTrfase	PFAM:PF00583	PFAM:PF00696	PFscan:PS51186	PANTHER:PTHR30602
PANTHER:PTHR30602:SF8	MetaCyc:PWY-5154	EnsemblPlantsGene:SORBI_3002G356200	SUPFAM:SSF53633	SUPFAM:SSF55729	unigene:Sbi.11322
TIGRFAMs:TIGR01890	UniParc:UPI0001A83C25	RefSeq:XP_002463095.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:71903811..71910206

Molecular Weight (calculated)

67418.4 Da

IEP (calculated)

8.445

GRAVY (calculated)

-0.147

Length

625 amino acids

Sequence
(BLAST)

001: MATSAVVARL AGEASRPKVL ASANGLSSSR SRVAVKRRWR GRGVRCCAAG SSGGGAGAGA VVPGEEFVGF FREAWPYIRG HRGSTFVVVM SSEVVSGPHF
101: DRVLQDISLL HGLGIKFILV PGTHVQIDKL LSERGKKAKY VGQYRITDKD SRDAAMDAAG RIRLTIEAKL SPGPPMLNLR RHGVIGRWHG LVDNIASGNF
201: LGAKRRGVVN GIDYGFTGEV TKIDVSRIRE RLDSDSIVVV SNMGYSSSGE VLNCNTYEVA TACALAMEAD KLICIVDGQI FDEHGRVIHY MSIEEADLLI
301: RKRAKQSDIA ASYVKVVDEE GINSLHKGDN GSSLSAKAHI NGYAASFQSG LGFNNGNSVY SGEQGFAIGG EERLSGSNAA SFQNGLGFNN GNGFYSGEQG
401: FAIGGEERLS RSNGYISELA AAAYVCHGGV QRVHVIDGSV DGSLLLELFT RDGSGTMIAR DVYEGTRMAI AEDLPGIRKI IRPLEDSGVL VRRTDAELLE
501: ALESFYVVER DGSIIACAAL FPFPEEKSGE VAAIAVSEEC RGRGQGDKLL DYVEKVALSL GLEKLFLLTT RTADWFVRRG FSECSIESIP EQRRKRINLS
601: RGSKYYIKQL QPKPAGVNAN NFVIR

Best Arabidopsis Sequence Match ( AT2G22910.1 )
(BLAST)

001: MTERGAMVVS SSTCYVPFRC PQARKDFAFV EPSKKLNPNR VLIKPPVYTY SPALTAAKCN IFDYAETGEN LVGDKQFVRW FREAWPYLWA HRSCTFVVTI
101: SGDVLDGPYC DLVLKDIAFL HHLGIKFVLV PGTQVQIDQL LAERGREPTY VGRYRVTDSA SLQAAKEAAG AISVMIEAKL SPGPSIYNIR RHGDSSRLHE
201: TGVRVDTGNF FAAKRRGVVD GVDFGATGLV KKIDVDRIRE RLDSGSVVLL RNLGHSSTGE VLNCNTYEVA TACALAIGAD KLICIMDGPV LDENGHLVRF
301: LTLQEADTLV RKRAQQSEIA ANYVKAVGDG GISSFPEPLG YNGMVTTPNN HIGRPIWEKL SPTFQNGVGF DNGNGLWSGE QGFAIGGEER ISRLNGYLSE
401: LAAAAFVCRG GVKRVHLLDG TISGVLLLEL FKRDGMGTMV ASDVYEGNRE AKVEDLAGIR QIIKPLEESG ALVRRTDEEL LRALDSFVVV EREGHIIACA
501: ALFPFFEEKC GEVAAIAVAS DCRGQGQGDK LLDYIEKKAS ALGLEMLFLL TTRTADWFVR RGFQECPIEM IPEARRERIN LSRRSKYYMK KLLPDRSGIS
601: VVRTFQYDS

Arabidopsis Description

NAGS1Probable amino-acid acetyltransferase NAGS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84JF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.