Factsheet for VIT_00s0670g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0823g00020.t01	Wine grape	plastid	99.52	88.63
Zm00001d047817_P001	Maize	cytosol	2.41	2.86
TraesCS2D01G196900.1	Wheat	mitochondrion, plastid	3.13	2.24
TraesCS2A01G191100.1	Wheat	mitochondrion, plastid	3.13	2.24
TraesCS2B01G215900.1	Wheat	mitochondrion, plastid	3.13	2.23
HORVU2Hr1G035970.1	Barley	mitochondrion, plastid	3.13	2.23
TraesCS7A01G241100.3	Wheat	plastid	2.65	1.88
Solyc02g092260.2.1	Tomato	nucleus	2.65	1.85
Zm00001d021956_P002	Maize	plastid	2.65	1.8
Zm00001d010837_P001	Maize	plastid	2.17	1.71
PGSC0003DMT400055176	Potato	plastid	2.41	1.68
EER99616	Sorghum	plastid	2.41	1.6
Os07t0585600-01	Rice	cytosol	1.69	1.31
KRH58132	Soybean	cytosol	0.96	1.14
VIT_07s0151g00510.t01	Wine grape	cytosol	0.72	0.86
Os03t0431200-00	Rice	cytosol, mitochondrion, plastid	0.96	0.79
KRH58131	Soybean	extracellular	0.0	0.0
VIT_07s0151g00160.t01	Wine grape	cytosol, nucleus	0.0	0.0

Protein Annotations

KEGG:00220+2.3.1.1	Gene3D:3.40.1160.10	MapMan:4.1.1.1.1.1	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	ProteinID:CCB59164
ProteinID:CCB59164.1	UniProt:F6HWV0	EMBL:FN596307	GO:GO:0003674	GO:GO:0003824	GO:GO:0004042
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006526	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	InterPro:IPR036393	InterPro:NAGS_kin
InterPro:NH2A_AcTrfase	PFAM:PF00696	PANTHER:PTHR30602	PANTHER:PTHR30602:SF4	SUPFAM:SSF53633	TIGRFAMs:TIGR01890
UniParc:UPI000210A1F5	ArrayExpress:VIT_00s0670g00020	EnsemblPlantsGene:VIT_00s0670g00020	EnsemblPlants:VIT_00s0670g00020.t01	RefSeq:XP_003635452	RefSeq:XP_003635452.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:33951286..33955386

Molecular Weight (calculated)

45830.9 Da

IEP (calculated)

9.218

GRAVY (calculated)

-0.218

Length

415 amino acids

Sequence
(BLAST)

001: MASSTSRLWT YLQNHGETTS ETWLPCTRRV RSQSKTGTTK RKYLVVRGCN WESEARNGGY RGCKISKQNE EYVTWVRGAH PYLHAHRGST FVVVISGEVI
101: QSPGFHSILK PIQHCVWSSG RGSRRFGSMK VLCSGQERAS VKCNVLGEAE NDGGGEESVP EKNEQFVRWF REAWPYFRAH RGGTFVVIIS GEIVASPYLE
201: PILKDISLLH GLGIRFVLVP GTHVQIDKLL AERGSEPKYV GQYRITDSAS LEAAMEAAGR IRIMIEAMLS PGPSICSIRR HGGNSRWHDV GVSVASGNFL
301: AAKRRGVVEG IDYGATGLVK RVDVSRIRER LDASCIVILS NLGYSSSGEV LNCNTYEVAT ACALAIGAEK LICVIDGPIL DENERLIRFL TLQDADTLIR
401: KRAKQSEIAA NYVKA

Best Arabidopsis Sequence Match ( AT2G22910.1 )
(BLAST)

001: MTERGAMVVS SSTCYVPFRC PQARKDFAFV EPSKKLNPNR VLIKPPVYTY SPALTAAKCN IFDYAETGEN LVGDKQFVRW FREAWPYLWA HRSCTFVVTI
101: SGDVLDGPYC DLVLKDIAFL HHLGIKFVLV PGTQVQIDQL LAERGREPTY VGRYRVTDSA SLQAAKEAAG AISVMIEAKL SPGPSIYNIR RHGDSSRLHE
201: TGVRVDTGNF FAAKRRGVVD GVDFGATGLV KKIDVDRIRE RLDSGSVVLL RNLGHSSTGE VLNCNTYEVA TACALAIGAD KLICIMDGPV LDENGHLVRF
301: LTLQEADTLV RKRAQQSEIA ANYVKAVGDG GISSFPEPLG YNGMVTTPNN HIGRPIWEKL SPTFQNGVGF DNGNGLWSGE QGFAIGGEER ISRLNGYLSE
401: LAAAAFVCRG GVKRVHLLDG TISGVLLLEL FKRDGMGTMV ASDVYEGNRE AKVEDLAGIR QIIKPLEESG ALVRRTDEEL LRALDSFVVV EREGHIIACA
501: ALFPFFEEKC GEVAAIAVAS DCRGQGQGDK LLDYIEKKAS ALGLEMLFLL TTRTADWFVR RGFQECPIEM IPEARRERIN LSRRSKYYMK KLLPDRSGIS
601: VVRTFQYDS

Arabidopsis Description

NAGS1Probable amino-acid acetyltransferase NAGS1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84JF4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.