Factsheet for GSMUA_Achr1P15050_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P13910_001	Banana	cytosol	84.68	88.51
GSMUA_Achr4P29450_001	Banana	cytosol	77.84	79.7
GSMUA_Achr2P11030_001	Banana	cytosol	70.99	78.33
OQU86029	Sorghum	cytosol	70.09	77.18
GSMUA_Achr9P08680_001	Banana	cytosol	60.72	71.4
Os02t0832000-01	Rice	plasma membrane	68.83	70.09
GSMUA_Achr2P08110_001	Banana	cytosol, plastid	62.34	69.9
GSMUA_Achr10P...	Banana	cytosol, plastid	63.24	69.64
TraesCS6D01G404800.1	Wheat	cytosol	69.55	68.81
TraesCS6A01G421000.1	Wheat	cytosol	69.37	68.63
GSMUA_Achr1P02840_001	Banana	cytosol, plastid	78.02	68.62
GSMUA_Achr6P25560_001	Banana	cytosol	59.46	68.61
HORVU6Hr1G094990.2	Barley	cytosol, plastid	69.73	68.13
TraesCS6B01G467300.1	Wheat	cytosol	69.19	67.61
GSMUA_Achr9P25890_001	Banana	plastid	57.3	66.53
GSMUA_Achr6P31900_001	Banana	mitochondrion	50.99	64.91
GSMUA_Achr7P07810_001	Banana	cytosol, plastid	57.84	63.82
GSMUA_AchrUn_...	Banana	cytosol	64.5	63.7
GSMUA_Achr9P05370_001	Banana	cytosol	47.57	59.19
GSMUA_Achr6P16000_001	Banana	cytosol	52.61	59.11
GSMUA_Achr2P06360_001	Banana	plasma membrane	54.77	58.91
GSMUA_Achr1P05040_001	Banana	cytosol	49.91	58.44
GSMUA_Achr8P01680_001	Banana	cytosol	52.79	58.37
GSMUA_Achr10P...	Banana	cytosol	52.79	58.25
GSMUA_Achr6P29450_001	Banana	cytosol	47.75	56.38
GSMUA_Achr8P21660_001	Banana	cytosol	47.75	55.91
GSMUA_Achr4P22740_001	Banana	cytosol, plastid	64.5	55.59
GSMUA_Achr5P27580_001	Banana	cytosol	53.15	53.93
GSMUA_Achr7P01360_001	Banana	cytosol	63.24	52.31
GSMUA_Achr2P13980_001	Banana	plasma membrane	50.09	44.27

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.510.10	MapMan:18.4.5.4	Gene3D:3.30.200.20	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005509	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G15050_001	EnsemblPlants:GSMUA_Achr1P15050_001
EnsemblPlants:GSMUA_Achr1T15050_001	InterPro:IPR000719	InterPro:IPR002048	InterPro:Kinase-like_dom_sf	UniProt:M0S013	PFAM:PF00069
PFAM:PF13499	ScanProsite:PS00018	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS50222
PANTHER:PTHR24349	PANTHER:PTHR24349:SF188	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00054	SMART:SM00220
SUPFAM:SSF47473	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029501B8	SEG:seg	:

Description

Calcium-dependent protein kinase 4 [Source:GMGC_GENE;Acc:GSMUA_Achr1G15050_001]

Coordinates

chr1:+:11353141..11360442

Molecular Weight (calculated)

62017.7 Da

IEP (calculated)

6.025

GRAVY (calculated)

-0.434

Length

555 amino acids

Sequence
(BLAST)

001: MGNTCRGSLA ANKYLPNYSG PVERSSSSTS SSDGTPRRRR HRHHNHLTSS TIADPTKPES DAVTMRRSGG GGGDTWVLGH KTASLRDLYT LGRKLGQGQF
101: GTTYLCTEGA TGKEFACKSI SKRKLTAKED VEDVRREIQI MHHLSGHRNV VTIKGAYEDP LYVHIVMELC EGGELFDRII QRGHYSERKA AELIRIVVGV
201: VEACHSLGVM HRDLKPENFL LANKDDDSSL KAIDFGLSVF FKPGQIFTDV VGSPYYVAPE VLRKHYGPEA DVWTAGVILY ILLSGVPPFW AETQQGIFDA
301: VLKGFIDFDT EPWPMISDSA KDLIRKMLCS RPSDRLTAHE VLCHPWICEN GVAPDQALDP AVLSRLKQFS AMNKLKKMAL RVIAESLSEE EIAGLREMFQ
401: AMDTDNSGAI TFDELKEGLK RYGSNLKESE IRDLMDAADV DNSGTIDYGE FVAATIHLNK LEREEHLAAA FSYFDKDGSG YITVDELQQA CKEHNMTDVL
501: IEDIIQEVDQ DNDGRIDYGE FVTMMRKGNM GHGRITMRNM RNSLKISRRD EPETP

Best Arabidopsis Sequence Match ( AT2G17290.2 )
(BLAST)

001: MGNSCRGSFK DKIYEGNHSR PEENSKSTTT TVSSVHSPTT DQDFSKQNTN PALVIPVKEP IMRRNVDNQS YYVLGHKTPN IRDLYTLSRK LGQGQFGTTY
101: LCTDIATGVD YACKSISKRK LISKEDVEDV RREIQIMHHL AGHKNIVTIK GAYEDPLYVH IVMELCAGGE LFDRIIHRGH YSERKAAELT KIIVGVVEAC
201: HSLGVMHRDL KPENFLLVNK DDDFSLKAID FGLSVFFKPG QIFKDVVGSP YYVAPEVLLK HYGPEADVWT AGVILYILLS GVPPFWAETQ QGIFDAVLKG
301: YIDFDTDPWP VISDSAKDLI RKMLCSSPSE RLTAHEVLRH PWICENGVAP DRALDPAVLS RLKQFSAMNK LKKMALKVIA ESLSEEEIAG LRAMFEAMDT
401: DNSGAITFDE LKAGLRRYGS TLKDTEIRDL MEAADVDNSG TIDYSEFIAA TIHLNKLERE EHLVSAFQYF DKDGSGYITI DELQQSCIEH GMTDVFLEDI
501: IKEVDQDNDG RIDYEEFVAM MQKGNAGVGR RTMKNSLNIS MRDV

Arabidopsis Description

CPK6Calcium-dependent protein kinase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q38872]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.