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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 4
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_18s0072g01030.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G01250.1 VIT_18s0072g01030.t01 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_09s0054g00060.t01 Wine grape cytosol 75.0 92.68
VIT_09s0054g00210.t01 Wine grape cytosol 90.13 91.95
VIT_00s2761g00010.t01 Wine grape cytosol 28.95 86.27
VIT_00s1526g00010.t01 Wine grape cytosol 30.26 85.19
VIT_09s0054g00090.t01 Wine grape cytosol 65.79 74.07
VIT_09s0054g00190.t01 Wine grape cytosol 55.26 63.64
VIT_00s2416g00010.t01 Wine grape cytosol 31.58 62.34
VIT_09s0054g00140.t01 Wine grape cytosol 69.08 56.45
VIT_09s0054g00010.t01 Wine grape cytosol 88.16 54.47
VIT_11s0052g00290.t01 Wine grape cytosol 83.55 51.84
PGSC0003DMT400075548 Potato cytosol 76.97 48.75
AT2G01250.1 Thale cress cytosol 76.97 48.35
CDY40393 Canola cytosol 76.32 47.93
CDY41074 Canola cytosol 76.32 47.93
CDY37358 Canola cytosol 76.32 47.93
CDY25941 Canola cytosol 76.32 47.93
CDY17686 Canola cytosol 76.32 47.93
Bra014334.1-P Field mustard cytosol 76.32 47.93
Bra017461.1-P Field mustard cytosol 76.32 47.93
Bra024895.1-P Field mustard cytosol 76.32 47.93
CDX77810 Canola cytosol, extracellular 76.32 47.93
AT3G13580.3 Thale cress cytosol 75.66 47.13
PGSC0003DMT400051218 Potato cytosol 74.34 46.69
Solyc07g008370.2.1 Tomato cytosol, nucleus, plastid, unclear 74.34 46.69
CDY17884 Canola cytosol, extracellular 73.68 46.28
Bra004806.1-P Field mustard cytosol 73.68 46.28
PGSC0003DMT400053653 Potato cytosol 74.34 46.12
Bra037665.1-P Field mustard cytosol 73.03 45.87
CDX83440 Canola cytosol, extracellular 73.03 45.68
AT2G44120.2 Thale cress cytosol 73.03 44.94
CDY30456 Canola cytosol 73.68 43.58
CDY01953 Canola cytosol 40.79 43.36
Bra000341.1-P Field mustard cytosol 50.0 38.78
CDY23419 Canola extracellular 73.03 37.0
CDX79781 Canola extracellular 30.92 29.38
VIT_09s0070g00130.t01 Wine grape cytosol 45.39 28.05
GSMUA_AchrUn_... Banana cytosol 13.82 26.58
VIT_09s0054g00070.t01 Wine grape extracellular 3.29 4.03
VIT_09s0054g00150.t01 Wine grape cytosol 1.97 3.41
CDX95588 Canola cytosol 0.0 0.0
Protein Annotations
MapMan:17.1.2.1.5Gene3D:3.30.1390.20ProteinID:CCB45091ProteinID:CCB45091.1ncoils:CoilUniProt:F6GYQ5
EMBL:FN594972GO:GO:0000463GO:GO:0002181GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0003735GO:GO:0005198GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005829GO:GO:0005840GO:GO:0006139GO:GO:0006412GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538GO:GO:0022625InterPro:IPR036919
InterPro:L30_ferredoxin-like_sfPFAM:PF00327PFAM:PF08079ScanProsite:PS00634PANTHER:PTHR11524PANTHER:PTHR11524:SF16
InterPro:Ribosomal_L30_CSInterPro:Ribosomal_L30_NInterPro:Ribosomal_L30_ferredoxin-likeInterPro:Ribosomal_L7_euk_arcSUPFAM:SSF55129UniParc:UPI0002109D19
ArrayExpress:VIT_09s0054g00030EnsemblPlantsGene:VIT_09s0054g00030EnsemblPlants:VIT_09s0054g00030.t01SEG:seg::
Description
No Description!
Coordinates
chr9:+:20189000..20216811
Molecular Weight (calculated)
17795.0 Da
IEP (calculated)
10.276
GRAVY (calculated)
-0.522
Length
152 amino acids
Sequence
(BLAST)
001: MDIGKKQEVE AKKKKNAENG KLIYSRAKQY AKEYEEQQKE LMQLKHEAKL KGGFYVDPEV KLLFIIRICG INAMHLKTRR ILQLLCLRQI FNGVFLKVNE
101: ATMNMLHRVE PYVTYGYPNL KSVRELIYKR GYGKLNKQRT ALTDNSIVEQ IA
Best Arabidopsis Sequence Match ( AT2G01250.2 )
(BLAST)
001: MVESKVVVPE SVLKKRKREE EWALEKKQNV EAAKKKNAEN RKLIFKRAEQ YSKEYAEKEK ELISLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK
101: KILQLLRLRQ IFNGVFLKVN KATMNMLRRV EPYVTYGFPN LKSVKELIYK RGYGKLNHQR IALTDNSIVE QPTTSFGHSS LRHH
Arabidopsis Description
RPL7B60S ribosomal protein L7-2 [Source:UniProtKB/Swiss-Prot;Acc:P60040]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.