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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40393 Canola cytosol 100.0 100.0
Bra024895.1-P Field mustard cytosol 98.76 98.76
Bra017461.1-P Field mustard cytosol 98.35 98.35
AT2G01250.1 Thale cress cytosol 96.28 96.28
OQU75637 Sorghum cytosol 20.66 92.59
Bra004806.1-P Field mustard cytosol 91.32 91.32
Bra037665.1-P Field mustard cytosol 90.5 90.5
Bra000341.1-P Field mustard cytosol 71.49 88.27
VIT_09s0054g00140.t01 Wine grape cytosol 66.53 86.56
KRH47287 Soybean nucleus 86.78 86.42
KRH44630 Soybean cytosol 86.36 86.01
Solyc07g008370.2.1 Tomato cytosol, nucleus, plastid, unclear 84.71 84.71
PGSC0003DMT400051218 Potato cytosol 84.71 84.71
VIT_11s0052g00290.t01 Wine grape cytosol 85.54 84.49
VIT_00s2761g00010.t01 Wine grape cytosol 17.77 84.31
PGSC0003DMT400075548 Potato cytosol 83.47 84.17
VIT_09s0054g00010.t01 Wine grape cytosol 85.54 84.15
KRH37351 Soybean endoplasmic reticulum 83.47 83.47
PGSC0003DMT400053653 Potato cytosol 82.23 81.22
VIT_09s0054g00210.t01 Wine grape cytosol 49.17 79.87
VIT_00s1526g00010.t01 Wine grape cytosol 17.77 79.63
VIT_09s0054g00060.t01 Wine grape cytosol 39.67 78.05
VIT_09s0054g00090.t01 Wine grape cytosol 43.39 77.78
Os04t0605900-01 Rice plastid 77.27 76.64
HORVU2Hr1G078780.1 Barley cytosol 16.12 76.47
VIT_09s0054g00030.t01 Wine grape cytosol 47.93 76.32
Zm00001d002395_P002 Maize cytosol, extracellular 76.86 76.23
TraesCS5B01G461300.1 Wheat cytosol 76.86 76.23
TraesCS5A01G452400.1 Wheat nucleus 76.86 76.23
HORVU7Hr1G057320.1 Barley cytosol 14.46 76.09
OQU75620 Sorghum cytosol 76.86 75.92
Zm00001d050193_P001 Maize cytosol, plasma membrane, plastid 76.86 75.92
KXG24783 Sorghum cytosol 76.86 75.92
TraesCS2A01G432600.1 Wheat cytosol, unclear 76.45 75.82
TraesCS5D01G462800.1 Wheat cytosol, golgi 76.45 75.82
Zm00001d026254_P001 Maize plastid 76.86 75.61
Os08t0234000-01 Rice nucleus 76.45 75.51
TraesCS2B01G453900.1 Wheat cytosol, golgi, unclear 76.03 75.41
TraesCS2D01G430500.1 Wheat golgi 75.62 75.0
Zm00001d024373_P001 Maize cytosol 76.45 74.9
HORVU5Hr1G108990.2 Barley cytosol 76.03 74.49
KXG27062 Sorghum cytosol 71.49 73.93
KRH12348 Soybean endoplasmic reticulum, nucleus 83.06 73.9
HORVU7Hr1G120140.1 Barley extracellular, peroxisome 26.45 71.91
Zm00001d030114_P001 Maize cytosol 73.97 71.03
HORVU6Hr1G079960.1 Barley cytosol, extracellular 26.86 67.01
KRH25929 Soybean cytosol 23.97 66.67
HORVU2Hr1G100970.4 Barley mitochondrion 75.62 62.67
Zm00001d041838_P003 Maize mitochondrion 32.23 62.4
VIT_00s2416g00010.t01 Wine grape cytosol 19.01 59.74
KXG27000 Sorghum plastid 65.7 56.79
OQU80131 Sorghum cytosol 76.86 56.02
VIT_09s0054g00190.t01 Wine grape cytosol 29.75 54.55
Bra008443.1-P Field mustard cytosol 42.98 39.54
Bra003583.1-P Field mustard cytosol 42.98 39.39
GSMUA_AchrUn_... Banana cytosol 9.92 30.38
HORVU5Hr1G109020.1 Barley extracellular 8.68 28.38
Protein Annotations
Gene3D:1.10.15.30MapMan:17.1.2.1.5Gene3D:3.30.1390.20EnsemblPlantsGene:Bra014334EnsemblPlants:Bra014334.1EnsemblPlants:Bra014334.1-P
ncoils:CoilInterPro:IPR023106InterPro:IPR036919InterPro:L30_ferredoxin-like_sfUniProt:M4DCW7PFAM:PF00327
PFAM:PF08079ScanProsite:PS00634PANTHER:PTHR11524PANTHER:PTHR11524:SF16InterPro:Ribosomal_L30_CSInterPro:Ribosomal_L30_N
InterPro:Ribosomal_L30_central_dom_arcInterPro:Ribosomal_L30_ferredoxin-likeInterPro:Ribosomal_L7_eukInterPro:Ribosomal_L7_euk_arcSUPFAM:SSF55129TIGRFAMs:TIGR01310
UniParc:UPI0002545BD4SEG:seg::::
Description
AT2G01250 (E=9e-111) | 60S ribosomal protein L7 (RPL7B)
Coordinates
chrA08:-:1550142..1551383
Molecular Weight (calculated)
27946.4 Da
IEP (calculated)
10.627
GRAVY (calculated)
-0.532
Length
242 amino acids
Sequence
(BLAST)
001: MAESKVVVPE SVLKKRKREE EWALAKKQTA EAAKKTNAAN RKLIYKRAEQ YAKEYAEKEK ELISLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK
101: KILQLLRLRQ IFNGVFLKVN KATMNMLRRV EPYVTYGFPN LKSVKELIYK RGYGKLNHQR VALTDNSIVE QALGKHGIIC TEDLIHEILT VGPHFKEANN
201: FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELIRR MN
Best Arabidopsis Sequence Match ( AT2G01250.1 )
(BLAST)
001: MVESKVVVPE SVLKKRKREE EWALEKKQNV EAAKKKNAEN RKLIFKRAEQ YSKEYAEKEK ELISLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK
101: KILQLLRLRQ IFNGVFLKVN KATMNMLRRV EPYVTYGFPN LKSVKELIYK RGYGKLNHQR IALTDNSIVE QALGKHGIIC TEDLIHEILT VGPHFKEANN
201: FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELIRR MN
Arabidopsis Description
RPL7B60S ribosomal protein L7-2 [Source:UniProtKB/Swiss-Prot;Acc:P60040]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.