Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014334.1-P | Field mustard | cytosol | 96.28 | 96.28 |
| CDX77810 | Canola | cytosol, extracellular | 96.28 | 96.28 |
| CDY17686 | Canola | cytosol | 96.28 | 96.28 |
| CDY40393 | Canola | cytosol | 96.28 | 96.28 |
| Bra017461.1-P | Field mustard | cytosol | 95.87 | 95.87 |
| Bra024895.1-P | Field mustard | cytosol | 95.87 | 95.87 |
| CDY25941 | Canola | cytosol | 95.87 | 95.87 |
| CDY37358 | Canola | cytosol | 95.87 | 95.87 |
| CDY41074 | Canola | cytosol | 95.45 | 95.45 |
| OQU75637 | Sorghum | cytosol | 20.66 | 92.59 |
| AT3G13580.3 | Thale cress | cytosol | 90.5 | 89.75 |
| AT2G44120.2 | Thale cress | cytosol | 89.26 | 87.45 |
| VIT_09s0054g00140.t01 | Wine grape | cytosol | 66.53 | 86.56 |
| KRH47287 | Soybean | nucleus | 86.36 | 86.01 |
| KRH37351 | Soybean | endoplasmic reticulum | 85.95 | 85.95 |
| KRH44630 | Soybean | cytosol | 85.95 | 85.6 |
| PGSC0003DMT400051218 | Potato | cytosol | 85.12 | 85.12 |
| Solyc07g008370.2.1 | Tomato | cytosol, nucleus, plastid, unclear | 85.12 | 85.12 |
| VIT_00s2761g00010.t01 | Wine grape | cytosol | 17.77 | 84.31 |
| PGSC0003DMT400075548 | Potato | cytosol | 83.47 | 84.17 |
| VIT_09s0054g00010.t01 | Wine grape | cytosol | 85.12 | 83.74 |
| VIT_11s0052g00290.t01 | Wine grape | cytosol | 84.71 | 83.67 |
| PGSC0003DMT400053653 | Potato | cytosol | 82.23 | 81.22 |
| VIT_09s0054g00210.t01 | Wine grape | cytosol | 49.59 | 80.54 |
| VIT_00s1526g00010.t01 | Wine grape | cytosol | 17.77 | 79.63 |
| VIT_09s0054g00060.t01 | Wine grape | cytosol | 40.08 | 78.86 |
| VIT_09s0054g00090.t01 | Wine grape | cytosol | 43.8 | 78.52 |
| Zm00001d002395_P002 | Maize | cytosol, extracellular | 78.51 | 77.87 |
| Zm00001d026254_P001 | Maize | plastid | 78.51 | 77.24 |
| Os04t0605900-01 | Rice | plastid | 77.69 | 77.05 |
| VIT_09s0054g00030.t01 | Wine grape | cytosol | 48.35 | 76.97 |
| TraesCS5B01G461300.1 | Wheat | cytosol | 77.27 | 76.64 |
| TraesCS5A01G452400.1 | Wheat | nucleus | 77.27 | 76.64 |
| HORVU2Hr1G078780.1 | Barley | cytosol | 16.12 | 76.47 |
| Zm00001d050193_P001 | Maize | cytosol, plasma membrane, plastid | 77.27 | 76.33 |
| Os08t0234000-01 | Rice | nucleus | 77.27 | 76.33 |
| KXG24783 | Sorghum | cytosol | 77.27 | 76.33 |
| OQU75620 | Sorghum | cytosol | 77.27 | 76.33 |
| TraesCS2D01G430500.1 | Wheat | golgi | 76.86 | 76.23 |
| TraesCS2A01G432600.1 | Wheat | cytosol, unclear | 76.86 | 76.23 |
| TraesCS5D01G462800.1 | Wheat | cytosol, golgi | 76.86 | 76.23 |
| HORVU7Hr1G057320.1 | Barley | cytosol | 14.46 | 76.09 |
| TraesCS2B01G453900.1 | Wheat | cytosol, golgi, unclear | 76.45 | 75.82 |
| HORVU5Hr1G108990.2 | Barley | cytosol | 77.27 | 75.71 |
| KXG27062 | Sorghum | cytosol | 72.73 | 75.21 |
| KRH12348 | Soybean | endoplasmic reticulum, nucleus | 84.3 | 75.0 |
| Zm00001d024373_P001 | Maize | cytosol | 76.03 | 74.49 |
| Zm00001d030114_P001 | Maize | cytosol | 75.21 | 72.22 |
| HORVU7Hr1G120140.1 | Barley | extracellular, peroxisome | 26.45 | 71.91 |
| HORVU6Hr1G079960.1 | Barley | cytosol, extracellular | 26.86 | 67.01 |
| KRH25929 | Soybean | cytosol | 23.97 | 66.67 |
| HORVU2Hr1G100970.4 | Barley | mitochondrion | 76.86 | 63.7 |
| Zm00001d041838_P003 | Maize | mitochondrion | 32.64 | 63.2 |
| VIT_00s2416g00010.t01 | Wine grape | cytosol | 19.42 | 61.04 |
| KXG27000 | Sorghum | plastid | 66.53 | 57.5 |
| OQU80131 | Sorghum | cytosol | 77.27 | 56.33 |
| VIT_09s0054g00190.t01 | Wine grape | cytosol | 30.58 | 56.06 |
| AT1G80750.1 | Thale cress | cytosol | 43.8 | 42.91 |
| GSMUA_AchrUn_... | Banana | cytosol | 9.92 | 30.38 |
| HORVU5Hr1G109020.1 | Barley | extracellular | 8.26 | 27.03 |
Protein Annotations
| Gene3D:1.10.15.30 | MapMan:17.1.2.1.5 | Gene3D:3.30.1390.20 | EntrezGene:814652 | UniProt:A0A178VX60 | ProteinID:AAD14525.1 |
| ProteinID:AEC05420.1 | EMBL:AF370484 | ArrayExpress:AT2G01250 | EnsemblPlantsGene:AT2G01250 | RefSeq:AT2G01250 | TAIR:AT2G01250 |
| RefSeq:AT2G01250-TAIR-G | EnsemblPlants:AT2G01250.1 | TAIR:AT2G01250.1 | EMBL:AY045994 | EMBL:AY079328 | EMBL:AY081698 |
| EMBL:AY085139 | Unigene:At.22748 | ncoils:Coil | GO:GO:0000463 | GO:GO:0002181 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0019538 | GO:GO:0022625 | GO:GO:0022626 | GO:GO:0030312 | GO:GO:0030529 |
| GO:GO:0042788 | InterPro:IPR023106 | InterPro:IPR036919 | InterPro:L30_ferredoxin-like_sf | RefSeq:NP_178234.1 | ProteinID:OAP10950.1 |
| UniProt:P60040 | PFAM:PF00327 | PFAM:PF08079 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00634 | PANTHER:PTHR11524 | PANTHER:PTHR11524:SF16 | InterPro:Ribosomal_L30_CS |
| InterPro:Ribosomal_L30_N | InterPro:Ribosomal_L30_central_dom_arc | InterPro:Ribosomal_L30_ferredoxin-like | InterPro:Ribosomal_L7_euk | InterPro:Ribosomal_L7_euk_arc | SUPFAM:SSF55129 |
| TIGRFAMs:TIGR01310 | UniParc:UPI00000A443D | EMBL:Z29141 | SEG:seg | : | : |
Description
RPL7B60S ribosomal protein L7-2 [Source:UniProtKB/Swiss-Prot;Acc:P60040]
Coordinates
chr2:-:132578..134455
Molecular Weight (calculated)
28172.7 Da
IEP (calculated)
10.598
GRAVY (calculated)
-0.574
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MVESKVVVPE SVLKKRKREE EWALEKKQNV EAAKKKNAEN RKLIFKRAEQ YSKEYAEKEK ELISLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK
101: KILQLLRLRQ IFNGVFLKVN KATMNMLRRV EPYVTYGFPN LKSVKELIYK RGYGKLNHQR IALTDNSIVE QALGKHGIIC TEDLIHEILT VGPHFKEANN
201: FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELIRR MN
101: KILQLLRLRQ IFNGVFLKVN KATMNMLRRV EPYVTYGFPN LKSVKELIYK RGYGKLNHQR IALTDNSIVE QALGKHGIIC TEDLIHEILT VGPHFKEANN
201: FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELIRR MN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.