Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53223 | Canola | cytosol | 85.83 | 80.61 |
| CDY66947 | Canola | cytosol | 85.83 | 80.61 |
| CDX79356 | Canola | cytosol | 83.81 | 80.54 |
| Bra008443.1-P | Field mustard | cytosol | 85.43 | 80.23 |
| Bra003583.1-P | Field mustard | cytosol | 85.02 | 79.55 |
| CDX67965 | Canola | cytosol | 85.02 | 79.55 |
| CDX67964 | Canola | cytosol | 49.8 | 68.72 |
| VIT_09s0070g00130.t01 | Wine grape | cytosol | 55.47 | 55.69 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 40.08 | 55.62 |
| KRH06635 | Soybean | cytosol | 53.04 | 55.51 |
| KRG94901 | Soybean | nucleus | 52.63 | 55.08 |
| PGSC0003DMT400073431 | Potato | cytosol | 53.04 | 53.25 |
| PGSC0003DMT400036807 | Potato | cytosol | 52.63 | 52.85 |
| Solyc06g068400.2.1 | Tomato | cytosol, nucleus | 52.63 | 52.85 |
| TraesCS7A01G266000.1 | Wheat | nucleus | 47.77 | 47.58 |
| TraesCS7B01G166400.1 | Wheat | cytosol | 47.77 | 47.58 |
| TraesCS7D01G268700.1 | Wheat | cytosol | 47.37 | 47.18 |
| Os08t0542100-01 | Rice | nucleus | 51.82 | 46.55 |
| Solyc03g117060.2.1 | Tomato | nucleus | 53.85 | 44.33 |
| AT2G01250.1 | Thale cress | cytosol | 42.91 | 43.8 |
| EES15262 | Sorghum | cytosol | 45.34 | 42.75 |
| AT3G13580.3 | Thale cress | cytosol | 42.11 | 42.62 |
| Zm00001d052719_P002 | Maize | cytosol | 44.94 | 42.37 |
| Zm00001d031703_P001 | Maize | cytosol, plasma membrane | 44.94 | 42.37 |
| AT2G44120.2 | Thale cress | cytosol | 41.7 | 41.7 |
| TraesCS1D01G134300.1 | Wheat | cytosol | 35.63 | 36.51 |
Protein Annotations
| Gene3D:1.10.15.30 | MapMan:17.1.2.1.5 | Gene3D:3.30.1390.20 | EntrezGene:844414 | UniProt:A0A178W267 | ProteinID:AAF14663.1 |
| ProteinID:AEE36444.1 | EMBL:AK227345 | ArrayExpress:AT1G80750 | EnsemblPlantsGene:AT1G80750 | RefSeq:AT1G80750 | TAIR:AT1G80750 |
| RefSeq:AT1G80750-TAIR-G | EnsemblPlants:AT1G80750.1 | TAIR:AT1G80750.1 | EMBL:BT003066 | GO:GO:0000463 | GO:GO:0002181 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 | GO:GO:0030529 | InterPro:IPR023106 |
| InterPro:IPR036919 | InterPro:L30_ferredoxin-like_sf | RefSeq:NP_178190.1 | ProteinID:OAP12580.1 | PFAM:PF00327 | PFAM:PF08079 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR11524 | PANTHER:PTHR11524:SF11 | UniProt:Q0WU42 | UniProt:Q9SAI5 | InterPro:Ribosomal_L30_N | InterPro:Ribosomal_L30_central_dom_arc |
| InterPro:Ribosomal_L30_ferredoxin-like | InterPro:Ribosomal_L7_euk | InterPro:Ribosomal_L7_euk_arc | SUPFAM:SSF55129 | TIGRFAMs:TIGR01310 | UniParc:UPI000000BEC2 |
| SEG:seg | : | : | : | : | : |
Description
RPL7A60S ribosomal protein L7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI5]
Coordinates
chr1:+:30348670..30350564
Molecular Weight (calculated)
28345.8 Da
IEP (calculated)
10.431
GRAVY (calculated)
-0.628
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEEAKGLD YIPEIVLKKR KNRDELAFIR KKQLELGNSG KKKKKVSDIK RPEDFVHEFR AKEVDMIRMK QRVKRPKSSP PPVKSDLVFI IRIQGKNDMH
101: PKTKRILNNL QLKSVFTGVF AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH KILGIEDLVN EIARVGDHFR
201: EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN DLISKMN
101: PKTKRILNNL QLKSVFTGVF AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH KILGIEDLVN EIARVGDHFR
201: EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN DLISKMN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.