Factsheet for GSMUA_AchrUn_randomP00650_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0070g00130.t01	Wine grape	cytosol	66.29	47.97
PGSC0003DMT400073431	Potato	cytosol	65.17	47.15
Solyc06g068400.2.1	Tomato	cytosol, nucleus	64.61	46.75
TraesCS7A01G266000.1	Wheat	nucleus	63.48	45.56
TraesCS7B01G166400.1	Wheat	cytosol	62.92	45.16
TraesCS7D01G268700.1	Wheat	cytosol	62.36	44.76
PGSC0003DMT400036807	Potato	cytosol	60.67	43.9
GSMUA_Achr4P05780_001	Banana	cytosol	60.11	43.85
GSMUA_Achr10P...	Banana	cytosol	59.55	43.44
GSMUA_Achr11P...	Banana	cytosol	59.55	43.44
Zm00001d031703_P001	Maize	cytosol, plasma membrane	63.48	43.13
EES15262	Sorghum	cytosol	63.48	43.13
Os08t0542100-01	Rice	nucleus	64.61	41.82
Zm00001d052719_P002	Maize	cytosol	60.11	40.84
KRG94901	Soybean	nucleus	53.37	40.25
AT1G80750.1	Thale cress	cytosol	55.62	40.08
KRH06635	Soybean	cytosol	52.81	39.83
GSMUA_Achr9P22960_001	Banana	cytosol	55.06	39.68
GSMUA_Achr4P12660_001	Banana	cytosol	59.55	36.55
Solyc03g117060.2.1	Tomato	nucleus	61.24	36.33
CDX79356	Canola	cytosol	52.25	36.19
CDY66947	Canola	cytosol	53.37	36.12
CDY53223	Canola	cytosol	53.37	36.12
Bra008443.1-P	Field mustard	cytosol	52.81	35.74
Bra003583.1-P	Field mustard	cytosol	51.69	34.85
CDX67965	Canola	cytosol	51.69	34.85
TraesCS1D01G134300.1	Wheat	cytosol	36.52	26.97
CDX67964	Canola	cytosol	21.35	21.23
GSMUA_AchrUn_...	Banana	cytosol	6.18	13.92

Protein Annotations

Gene3D:1.10.15.30	MapMan:17.1.2.1.5	Gene3D:3.30.1390.20	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0022625	EnsemblPlantsGene:GSMUA_AchrUn_randomG00650_001	EnsemblPlants:GSMUA_AchrUn_randomP00650_001	EnsemblPlants:GSMUA_AchrUn_randomT00650_001
InterPro:IPR023106	InterPro:IPR036919	InterPro:L30_ferredoxin-like_sf	UniProt:M0U577	PFAM:PF00327	ScanProsite:PS00634
PANTHER:PTHR11524	PANTHER:PTHR11524:SF11	InterPro:Ribosomal_L30_CS	InterPro:Ribosomal_L30_central_dom_arc	InterPro:Ribosomal_L30_ferredoxin-like	InterPro:Ribosomal_L7_euk
InterPro:Ribosomal_L7_euk_arc	SUPFAM:SSF55129	TIGRFAMs:TIGR01310	UniParc:UPI0002950415	:	:

Description

60S ribosomal protein L7-3 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG00650_001]

Coordinates

chrchrUn_random:-:2929782..2931774

Molecular Weight (calculated)

20618.5 Da

IEP (calculated)

10.450

GRAVY (calculated)

-0.453

Length

178 amino acids

Sequence
(BLAST)

001: MKQRLKLRKS SNDAIKSKLL FVIRIHGSKD MHPRTRQILN KLRLRHILSG VFLKANEANL RMLLTVEPFI TYGYPTLKSV RELVYKKGCG NIEKERTPLT
101: DNNVIEQALG KYGIICLEDV VHEIATVGSH FKEVTSFLWS FKLKCPERRL QMKKKLYKEG GDAGNREDHI NELIDKLN

Best Arabidopsis Sequence Match ( AT2G44120.1 )
(BLAST)

001: MAESKVVVPE SVLKKIKRQE EWALAKKDEA VAAKKKSVEA RKLIFKRAEQ YAKEYAEKDN ELIRLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK
101: KILQLLRLRQ IFNGVFLKVN KATVNMLRRV EPYVTYGYPN LKSVKELIYK RGYGKLNHQR IALTDNSIVD QALGKHGIIC VEDLIHEIMT VGPHFKEANN
201: FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELVRR MN

Arabidopsis Description

Ribosomal protein L30/L7 family protein [Source:UniProtKB/TrEMBL;Acc:F4IT48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.