CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94901	Soybean	nucleus	96.19	96.19
VIT_09s0070g00130.t01	Wine grape	cytosol	61.44	58.94
PGSC0003DMT400036807	Potato	cytosol	59.32	56.91
Solyc06g068400.2.1	Tomato	cytosol, nucleus	58.9	56.5
PGSC0003DMT400073431	Potato	cytosol	58.9	56.5
CDX79356	Canola	cytosol	58.05	53.31
AT1G80750.1	Thale cress	cytosol	55.51	53.04
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	39.83	52.81
CDY66947	Canola	cytosol	57.63	51.71
CDY53223	Canola	cytosol	57.2	51.33
Bra008443.1-P	Field mustard	cytosol	57.2	51.33
CDX67965	Canola	cytosol	56.78	50.76
Bra003583.1-P	Field mustard	cytosol	56.78	50.76
KRH25929	Soybean	cytosol	17.37	47.13
Solyc03g117060.2.1	Tomato	nucleus	59.75	47.0
KRH47287	Soybean	nucleus	47.46	46.09
KRH44630	Soybean	cytosol	46.61	45.27
KRH37351	Soybean	endoplasmic reticulum	45.76	44.63
CDX67964	Canola	cytosol	33.05	43.58
TraesCS7A01G266000.1	Wheat	nucleus	45.76	43.55
TraesCS7B01G166400.1	Wheat	cytosol	45.76	43.55
TraesCS7D01G268700.1	Wheat	cytosol	45.34	43.15
EES15262	Sorghum	cytosol	44.92	40.46
Os08t0542100-01	Rice	nucleus	47.03	40.36
Zm00001d031703_P001	Maize	cytosol, plasma membrane	44.49	40.08
KRH12348	Soybean	endoplasmic reticulum, nucleus	45.76	39.71
Zm00001d052719_P002	Maize	cytosol	43.22	38.93
TraesCS1D01G134300.1	Wheat	cytosol	33.9	33.2

Protein Annotations

Gene3D:1.10.15.30	MapMan:17.1.2.1.5	Gene3D:3.30.1390.20	UniProt:A0A0R0FKY9	EMBL:ACUP02009855	EnsemblPlantsGene:GLYMA_16G036200
GO:GO:0000463	GO:GO:0002181	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006139	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	InterPro:IPR023106	InterPro:IPR036919
EnsemblPlants:KRH06635	ProteinID:KRH06635	ProteinID:KRH06635.1	ProteinID:KRH06636.1	InterPro:L30_ferredoxin-like_sf	PFAM:PF00327
PANTHER:PTHR11524	PANTHER:PTHR11524:SF11	InterPro:Ribosomal_L30_central_dom_arc	InterPro:Ribosomal_L30_ferredoxin-like	InterPro:Ribosomal_L7_euk	InterPro:Ribosomal_L7_euk_arc
SUPFAM:SSF55129	TIGRFAMs:TIGR01310	UniParc:UPI0006EE0229	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:3441325..3443715

Molecular Weight (calculated)

27893.1 Da

IEP (calculated)

10.502

GRAVY (calculated)

-0.822

Length

236 amino acids

Sequence
(BLAST)

001: MAEEDSKPLN YISEVILKKR KNTEAWALRK KEQFQQKKYQ SIKKPEDFIH EYRNKEVDLI RMKRRVKRKV PEANSNTLII IRIQGKKDRH PRTRKVLYSL
101: GLRRRFSAVF VKPSEGIMAK LQRVEPYVTY GYPNLKSIKE LIYKKGHARM EQRKVPLTDN NIIEQELGKF GIVCIEDMVH QIYNAGPHFK EVVRFMWPFE
201: LNKPAEGLKG SKTSFKEDGD TGNREDLINE LINKMN

Best Arabidopsis Sequence Match ( AT1G80750.1 )
(BLAST)

001: MAEEEAKGLD YIPEIVLKKR KNRDELAFIR KKQLELGNSG KKKKKVSDIK RPEDFVHEFR AKEVDMIRMK QRVKRPKSSP PPVKSDLVFI IRIQGKNDMH
101: PKTKRILNNL QLKSVFTGVF AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH KILGIEDLVN EIARVGDHFR
201: EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN DLISKMN

Arabidopsis Description

RPL7A60S ribosomal protein L7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.