Factsheet for TraesCS7B01G166400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G266000.1	Wheat	nucleus	98.39	98.39
TraesCS7D01G268700.1	Wheat	cytosol	97.98	97.98
Os08t0542100-01	Rice	nucleus	81.45	73.45
EES15262	Sorghum	cytosol	72.58	68.7
Zm00001d031703_P001	Maize	cytosol, plasma membrane	72.18	68.32
Zm00001d052719_P002	Maize	cytosol	69.35	65.65
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	45.16	62.92
Solyc06g068400.2.1	Tomato	cytosol, nucleus	52.02	52.44
VIT_09s0070g00130.t01	Wine grape	cytosol	51.61	52.03
PGSC0003DMT400073431	Potato	cytosol	51.61	52.03
PGSC0003DMT400036807	Potato	cytosol	50.81	51.22
AT1G80750.1	Thale cress	cytosol	47.58	47.77
CDX79356	Canola	cytosol	47.58	45.91
KRH06635	Soybean	cytosol	43.55	45.76
KRG94901	Soybean	nucleus	43.15	45.34
CDY66947	Canola	cytosol	46.37	43.73
Bra008443.1-P	Field mustard	cytosol	45.97	43.35
CDY53223	Canola	cytosol	45.97	43.35
CDX67965	Canola	cytosol	45.97	43.18
Bra003583.1-P	Field mustard	cytosol	45.97	43.18
Solyc03g117060.2.1	Tomato	nucleus	51.61	42.67
TraesCS2B01G453900.1	Wheat	cytosol, golgi, unclear	39.92	40.57
TraesCS5B01G461300.1	Wheat	cytosol	39.52	40.16
CDX67964	Canola	cytosol	24.6	34.08

Protein Annotations

Gene3D:1.10.15.30	MapMan:17.1.2.1.5	Gene3D:3.30.1390.20	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0022625	InterPro:IPR023106	InterPro:IPR036919	InterPro:L30_ferredoxin-like_sf
PFAM:PF00327	PFAM:PF08079	PANTHER:PTHR11524	PANTHER:PTHR11524:SF11	InterPro:Ribosomal_L30_N	InterPro:Ribosomal_L30_central_dom_arc
InterPro:Ribosomal_L30_ferredoxin-like	InterPro:Ribosomal_L7_euk	InterPro:Ribosomal_L7_euk_arc	SUPFAM:SSF55129	TIGRFAMs:TIGR01310	EnsemblPlantsGene:TraesCS7B01G166400
EnsemblPlants:TraesCS7B01G166400.1	TIGR:cd01657	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:+:229825889..229827217

Molecular Weight (calculated)

28759.2 Da

IEP (calculated)

10.800

GRAVY (calculated)

-0.692

Length

248 amino acids

Sequence
(BLAST)

001: MAEEEGTQQL PFVRETVLKK RKDNEEWATK NRERKAAKRQ RRRHDAKGAI KRPEDFVREF RNKELDFLRM RTRLKVRNLR PAEAIDAKLL FAIRIPGTAD
101: LHPQIRKILA RLRLTQVLTG VFLKATETNL KRLAAVGPFV TYGFPNLKNV KELIYKKGRG YFDKEPFPLT SNDLIEKALG EHGVICLEDV VHEISTVGPH
201: FRETASFLMP FKLKCPERRL QMKKKPFKDG GDSGNRGDKI NELLEKLN

Best Arabidopsis Sequence Match ( AT1G80750.1 )
(BLAST)

001: MAEEEAKGLD YIPEIVLKKR KNRDELAFIR KKQLELGNSG KKKKKVSDIK RPEDFVHEFR AKEVDMIRMK QRVKRPKSSP PPVKSDLVFI IRIQGKNDMH
101: PKTKRILNNL QLKSVFTGVF AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH KILGIEDLVN EIARVGDHFR
201: EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN DLISKMN

Arabidopsis Description

RPL7A60S ribosomal protein L7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.