Factsheet for TraesCS7D01G268700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G166400.1	Wheat	cytosol	97.98	97.98
TraesCS7A01G266000.1	Wheat	nucleus	97.98	97.98
Os08t0542100-01	Rice	nucleus	80.24	72.36
TraesCS1D01G134300.1	Wheat	cytosol	67.34	69.29
EES15262	Sorghum	cytosol	71.77	67.94
Zm00001d031703_P001	Maize	cytosol, plasma membrane	71.37	67.56
Zm00001d052719_P002	Maize	cytosol	68.55	64.89
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	44.76	62.36
VIT_09s0070g00130.t01	Wine grape	cytosol	50.81	51.22
Solyc06g068400.2.1	Tomato	cytosol, nucleus	50.81	51.22
PGSC0003DMT400073431	Potato	cytosol	50.4	50.81
PGSC0003DMT400036807	Potato	cytosol	49.6	50.0
AT1G80750.1	Thale cress	cytosol	47.18	47.37
CDX79356	Canola	cytosol	47.18	45.53
KRH06635	Soybean	cytosol	43.15	45.34
KRG94901	Soybean	nucleus	42.74	44.92
Bra008443.1-P	Field mustard	cytosol	46.37	43.73
CDY66947	Canola	cytosol	45.97	43.35
CDY53223	Canola	cytosol	45.56	42.97
CDX67965	Canola	cytosol	45.56	42.8
Bra003583.1-P	Field mustard	cytosol	45.56	42.8
Solyc03g117060.2.1	Tomato	nucleus	50.4	41.67
TraesCS2D01G430500.1	Wheat	golgi	40.73	41.39
TraesCS5D01G462800.1	Wheat	cytosol, golgi	40.32	40.98
CDX67964	Canola	cytosol	24.19	33.52

Protein Annotations

EnsemblPlants:TraesCS7D01G268700.1	EnsemblPlantsGene:TraesCS7D01G268700	Gene3D:1.10.15.30	Gene3D:3.30.1390.20	InterPro:IPR023106	InterPro:IPR036919
InterPro:L30_ferredoxin-like_sf	InterPro:Ribosomal_L30_N	InterPro:Ribosomal_L30_central_dom_arc	InterPro:Ribosomal_L30_ferredoxin-like	InterPro:Ribosomal_L7_euk	InterPro:Ribosomal_L7_euk_arc
PANTHER:PTHR11524	PANTHER:PTHR11524:SF11	PFAM:PF00327	PFAM:PF08079	SUPFAM:SSF55129	TIGR:cd01657
TIGRFAMs:TIGR01310	MapMan:17.1.2.1.5	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:252544435..252545755

Molecular Weight (calculated)

28662.1 Da

IEP (calculated)

10.722

GRAVY (calculated)

-0.657

Length

248 amino acids

Sequence
(BLAST)

001: MAEEEGTQQL PFVRETVLKK RKDNEEWATK NRERKAAKRQ RRCHDAKGAI KRPEDFVKEF RNKELDFLRM RTRLKVRNLR PAEAIDAKLL FAVRIPGTAD
101: LHPQIRKILA RLRLTQVLTG VFLKATEANL KRLAAVGPFV TYGFPNLKNV KELIYKKGRG YFDKEPFPLT SNDLIEKALG EHGVICLEDV VHEISTVGPH
201: FRETASFLMP FKLKCPERRL RMKKKPFKDG GDSGNRGDKI NELLEKLN

Best Arabidopsis Sequence Match ( AT1G80750.1 )
(BLAST)

001: MAEEEAKGLD YIPEIVLKKR KNRDELAFIR KKQLELGNSG KKKKKVSDIK RPEDFVHEFR AKEVDMIRMK QRVKRPKSSP PPVKSDLVFI IRIQGKNDMH
101: PKTKRILNNL QLKSVFTGVF AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH KILGIEDLVN EIARVGDHFR
201: EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN DLISKMN

Arabidopsis Description

RPL7A60S ribosomal protein L7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.