Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 47.97 | 66.29 |
| PGSC0003DMT400073431 | Potato | cytosol | 66.26 | 66.26 |
| Solyc06g068400.2.1 | Tomato | cytosol, nucleus | 65.85 | 65.85 |
| PGSC0003DMT400036807 | Potato | cytosol | 64.23 | 64.23 |
| KRG94901 | Soybean | nucleus | 58.94 | 61.44 |
| KRH06635 | Soybean | cytosol | 58.94 | 61.44 |
| VIT_09s0054g00140.t01 | Wine grape | cytosol | 43.09 | 56.99 |
| AT1G80750.1 | Thale cress | cytosol | 55.69 | 55.47 |
| CDX79356 | Canola | cytosol | 57.72 | 55.25 |
| VIT_11s0052g00290.t01 | Wine grape | cytosol | 54.88 | 55.1 |
| VIT_09s0054g00150.t01 | Wine grape | cytosol | 19.51 | 54.55 |
| CDY66947 | Canola | cytosol | 57.72 | 53.99 |
| Bra008443.1-P | Field mustard | cytosol | 57.32 | 53.61 |
| CDY53223 | Canola | cytosol | 56.91 | 53.23 |
| Solyc03g117060.2.1 | Tomato | nucleus | 64.63 | 53.0 |
| VIT_00s2761g00010.t01 | Wine grape | cytosol | 10.98 | 52.94 |
| VIT_09s0054g00010.t01 | Wine grape | cytosol | 52.85 | 52.85 |
| CDX67965 | Canola | cytosol | 56.5 | 52.65 |
| Bra003583.1-P | Field mustard | cytosol | 56.5 | 52.65 |
| TraesCS7A01G266000.1 | Wheat | nucleus | 52.03 | 51.61 |
| TraesCS7B01G166400.1 | Wheat | cytosol | 52.03 | 51.61 |
| TraesCS7D01G268700.1 | Wheat | cytosol | 51.22 | 50.81 |
| VIT_00s1526g00010.t01 | Wine grape | cytosol | 10.98 | 50.0 |
| VIT_09s0054g00090.t01 | Wine grape | cytosol | 25.2 | 45.93 |
| VIT_09s0054g00030.t01 | Wine grape | cytosol | 28.05 | 45.39 |
| EES15262 | Sorghum | cytosol | 47.97 | 45.04 |
| VIT_09s0054g00210.t01 | Wine grape | cytosol | 27.24 | 44.97 |
| Os08t0542100-01 | Rice | nucleus | 50.0 | 44.73 |
| VIT_09s0054g00060.t01 | Wine grape | cytosol | 22.36 | 44.72 |
| Zm00001d031703_P001 | Maize | cytosol, plasma membrane | 47.15 | 44.27 |
| Zm00001d052719_P002 | Maize | cytosol | 45.94 | 43.13 |
| CDX67964 | Canola | cytosol | 29.67 | 40.78 |
| VIT_09s0054g00070.t01 | Wine grape | extracellular | 20.33 | 40.32 |
| VIT_00s2416g00010.t01 | Wine grape | cytosol | 12.2 | 38.96 |
| TraesCS1D01G134300.1 | Wheat | cytosol | 36.18 | 36.93 |
| VIT_09s0054g00190.t01 | Wine grape | cytosol | 16.67 | 31.06 |
Protein Annotations
| Gene3D:1.10.15.30 | EntrezGene:100267028 | wikigene:100267028 | MapMan:17.1.2.1.5 | Gene3D:3.30.1390.20 | ProteinID:CBI38935 |
| ProteinID:CBI38935.3 | UniProt:D7U871 | EMBL:FN596740 | GO:GO:0000463 | GO:GO:0002181 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 | InterPro:IPR023106 | InterPro:IPR036919 | InterPro:L30_ferredoxin-like_sf |
| EntrezGene:LOC100267028 | wikigene:LOC100267028 | PFAM:PF00327 | PFAM:PF08079 | PANTHER:PTHR11524 | PANTHER:PTHR11524:SF11 |
| InterPro:Ribosomal_L30_N | InterPro:Ribosomal_L30_central_dom_arc | InterPro:Ribosomal_L30_ferredoxin-like | InterPro:Ribosomal_L7_euk | InterPro:Ribosomal_L7_euk_arc | SUPFAM:SSF55129 |
| TIGR:TC68750 | TIGRFAMs:TIGR01310 | UniParc:UPI00015CB96C | ArrayExpress:VIT_09s0070g00130 | EnsemblPlantsGene:VIT_09s0070g00130 | EnsemblPlants:VIT_09s0070g00130.t01 |
| unigene:Vvi.11788 | RefSeq:XP_002272916 | RefSeq:XP_002272916.1 | : | : | : |
Description
No Description!
Coordinates
chr9:+:13099812..13108195
Molecular Weight (calculated)
28719.2 Da
IEP (calculated)
10.358
GRAVY (calculated)
-0.695
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEEPKPLT YIPEVILKKR KSNEEWAIKR RQQLEERNLR SKQNKAFNLK TAEQYIQEYR NRELDLIQMK HRGKKRKLSL ETLDSKLLFV IRIQGKNDMH
101: PKTRKILYFL RLRKIFDGVL VKANEGILEM LQKVEPYVAY GYPNLKNVRE LIYKKGFAKI EGQKVPLTDN NIIEQALGKH GIMCIEDIVH EIANVGPHFK
201: EVNSFLWPFT LNKPEGGFQG KKKLFKEGGD AGNRGDKINE LIGKMN
101: PKTRKILYFL RLRKIFDGVL VKANEGILEM LQKVEPYVAY GYPNLKNVRE LIYKKGFAKI EGQKVPLTDN NIIEQALGKH GIMCIEDIVH EIANVGPHFK
201: EVNSFLWPFT LNKPEGGFQG KKKLFKEGGD AGNRGDKINE LIGKMN
001: MAEEEAKGLD YIPEIVLKKR KNRDELAFIR KKQLELGNSG KKKKKVSDIK RPEDFVHEFR AKEVDMIRMK QRVKRPKSSP PPVKSDLVFI IRIQGKNDMH
101: PKTKRILNNL QLKSVFTGVF AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH KILGIEDLVN EIARVGDHFR
201: EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN DLISKMN
101: PKTKRILNNL QLKSVFTGVF AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH KILGIEDLVN EIARVGDHFR
201: EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN DLISKMN
Arabidopsis Description
RPL7A60S ribosomal protein L7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.