Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75637 | Sorghum | cytosol | 60.23 | 98.15 |
| VIT_09s0054g00070.t01 | Wine grape | extracellular | 81.82 | 58.06 |
| VIT_09s0054g00140.t01 | Wine grape | cytosol | 81.82 | 38.71 |
| VIT_09s0054g00010.t01 | Wine grape | cytosol | 85.23 | 30.49 |
| VIT_11s0052g00290.t01 | Wine grape | cytosol | 81.82 | 29.39 |
| Os04t0605900-01 | Rice | plastid | 80.68 | 29.1 |
| Os08t0234000-01 | Rice | nucleus | 79.55 | 28.57 |
| GSMUA_Achr11P... | Banana | cytosol | 78.41 | 28.28 |
| Zm00001d050193_P001 | Maize | cytosol, plasma membrane, plastid | 78.41 | 28.16 |
| Zm00001d026254_P001 | Maize | plastid | 78.41 | 28.05 |
| Zm00001d024373_P001 | Maize | cytosol | 78.41 | 27.94 |
| GSMUA_Achr10P... | Banana | cytosol | 77.27 | 27.87 |
| GSMUA_Achr4P05780_001 | Banana | cytosol | 77.27 | 27.87 |
| Zm00001d002395_P002 | Maize | cytosol, extracellular | 77.27 | 27.87 |
| TraesCS5D01G462800.1 | Wheat | cytosol, golgi | 77.27 | 27.87 |
| TraesCS5B01G461300.1 | Wheat | cytosol | 77.27 | 27.87 |
| TraesCS5A01G452400.1 | Wheat | nucleus | 77.27 | 27.87 |
| TraesCS2D01G430500.1 | Wheat | golgi | 77.27 | 27.87 |
| TraesCS2B01G453900.1 | Wheat | cytosol, golgi, unclear | 77.27 | 27.87 |
| TraesCS2A01G432600.1 | Wheat | cytosol, unclear | 77.27 | 27.87 |
| Zm00001d030114_P001 | Maize | cytosol | 77.27 | 26.98 |
| HORVU5Hr1G108990.2 | Barley | cytosol | 75.0 | 26.72 |
| GSMUA_Achr9P22960_001 | Banana | cytosol | 72.73 | 25.91 |
| HORVU2Hr1G100970.4 | Barley | mitochondrion | 78.41 | 23.63 |
| GSMUA_Achr4P12660_001 | Banana | cytosol | 77.27 | 23.45 |
| Zm00001d041838_P003 | Maize | mitochondrion | 30.68 | 21.6 |
| HORVU5Hr1G109020.1 | Barley | extracellular | 17.05 | 20.27 |
| VIT_09s0054g00090.t01 | Wine grape | cytosol | 30.68 | 20.0 |
| VIT_09s0070g00130.t01 | Wine grape | cytosol | 54.55 | 19.51 |
| HORVU6Hr1G079960.1 | Barley | cytosol, extracellular | 9.09 | 8.25 |
| HORVU7Hr1G120140.1 | Barley | extracellular, peroxisome | 7.95 | 7.87 |
| HORVU2Hr1G078780.1 | Barley | cytosol | 4.55 | 7.84 |
| VIT_00s2416g00010.t01 | Wine grape | cytosol | 6.82 | 7.79 |
| VIT_09s0054g00190.t01 | Wine grape | cytosol | 11.36 | 7.58 |
| VIT_00s2761g00010.t01 | Wine grape | cytosol | 3.41 | 5.88 |
| VIT_00s1526g00010.t01 | Wine grape | cytosol | 3.41 | 5.56 |
| VIT_09s0054g00060.t01 | Wine grape | cytosol | 3.41 | 2.44 |
| HORVU7Hr1G057320.1 | Barley | cytosol | 1.14 | 2.17 |
| VIT_09s0054g00210.t01 | Wine grape | cytosol | 3.41 | 2.01 |
| VIT_09s0054g00030.t01 | Wine grape | cytosol | 3.41 | 1.97 |
Protein Annotations
| MapMan:35.1 | ProteinID:CCB45084 | ProteinID:CCB45084.1 | UniProt:F6GYP8 | EMBL:FN594972 | GO:GO:0000463 |
| GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 | InterPro:IPR036919 | InterPro:L30_ferredoxin-like_sf | PANTHER:PTHR11524 |
| PANTHER:PTHR11524:SF16 | SUPFAM:SSF55129 | UniParc:UPI0002109D12 | ArrayExpress:VIT_09s0054g00150 | EnsemblPlantsGene:VIT_09s0054g00150 | EnsemblPlants:VIT_09s0054g00150.t01 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:20346043..20360572
Molecular Weight (calculated)
10222.6 Da
IEP (calculated)
9.949
GRAVY (calculated)
-0.560
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MIFGMVGEEK MKKERDRALG KFGIICMEDL IHEIMTVGPH FKEANNFLWP FKLKAPLGGL KKKRNHYVEG GDAGNRENYI NELIRRMN
001: MAESKVVVPE SVLKKIKRQE EWALAKKDEA VAAKKKSVEA RKLIFKRAEQ YAKEYAEKDN ELIRLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK
101: KILQLLRLRQ IFNGVFLKVN KATVNMLRRV EPYVTYGYPN LKSVKELIYK RGYGKLNHQR IALTDNSIVD QALGKHGIIC VEDLIHEIMT VGPHFKEANN
201: FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELVRR MN
101: KILQLLRLRQ IFNGVFLKVN KATVNMLRRV EPYVTYGYPN LKSVKELIYK RGYGKLNHQR IALTDNSIVD QALGKHGIIC VEDLIHEIMT VGPHFKEANN
201: FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELVRR MN
Arabidopsis Description
Ribosomal protein L30/L7 family protein [Source:UniProtKB/TrEMBL;Acc:F4IT48]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.