Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 95.49 | 95.49 |
| GSMUA_Achr4P05780_001 | Banana | cytosol | 94.26 | 94.26 |
| Os08t0234000-01 | Rice | nucleus | 86.89 | 86.53 |
| Os04t0605900-01 | Rice | plastid | 85.66 | 85.66 |
| HORVU2Hr1G078780.1 | Barley | cytosol | 17.62 | 84.31 |
| OQU75620 | Sorghum | cytosol | 84.43 | 84.08 |
| KXG24783 | Sorghum | cytosol | 84.43 | 84.08 |
| Zm00001d002395_P002 | Maize | cytosol, extracellular | 84.02 | 84.02 |
| Zm00001d050193_P001 | Maize | cytosol, plasma membrane, plastid | 84.02 | 83.67 |
| TraesCS2A01G432600.1 | Wheat | cytosol, unclear | 82.38 | 82.38 |
| Zm00001d024373_P001 | Maize | cytosol | 83.2 | 82.19 |
| Zm00001d026254_P001 | Maize | plastid | 82.79 | 82.11 |
| TraesCS5D01G462800.1 | Wheat | cytosol, golgi | 81.97 | 81.97 |
| TraesCS5B01G461300.1 | Wheat | cytosol | 81.97 | 81.97 |
| TraesCS5A01G452400.1 | Wheat | nucleus | 81.97 | 81.97 |
| TraesCS2B01G453900.1 | Wheat | cytosol, golgi, unclear | 81.97 | 81.97 |
| HORVU5Hr1G108990.2 | Barley | cytosol | 82.79 | 81.78 |
| TraesCS2D01G430500.1 | Wheat | golgi | 81.56 | 81.56 |
| KXG27062 | Sorghum | cytosol | 77.46 | 80.77 |
| GSMUA_Achr4P12660_001 | Banana | cytosol | 94.67 | 79.66 |
| GSMUA_Achr9P22960_001 | Banana | cytosol | 79.51 | 78.54 |
| VIT_09s0054g00150.t01 | Wine grape | cytosol | 28.28 | 78.41 |
| Zm00001d030114_P001 | Maize | cytosol | 80.74 | 78.17 |
| HORVU7Hr1G057320.1 | Barley | cytosol | 14.34 | 76.09 |
| HORVU7Hr1G120140.1 | Barley | extracellular, peroxisome | 27.46 | 75.28 |
| HORVU6Hr1G079960.1 | Barley | cytosol, extracellular | 28.28 | 71.13 |
| Zm00001d041838_P003 | Maize | mitochondrion | 36.07 | 70.4 |
| HORVU2Hr1G100970.4 | Barley | mitochondrion | 82.38 | 68.84 |
| KXG27000 | Sorghum | plastid | 71.31 | 62.14 |
| OQU80131 | Sorghum | cytosol | 84.43 | 62.05 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 43.44 | 59.55 |
| VIT_09s0054g00070.t01 | Wine grape | extracellular | 28.28 | 55.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 12.7 | 39.24 |
| HORVU5Hr1G109020.1 | Barley | extracellular | 7.79 | 25.68 |
Protein Annotations
| Gene3D:1.10.15.30 | MapMan:17.1.2.1.5 | Gene3D:3.30.1390.20 | ncoils:Coil | EnsemblPlantsGene:GSMUA_Achr11G08130_001 | EnsemblPlants:GSMUA_Achr11P08130_001 |
| EnsemblPlants:GSMUA_Achr11T08130_001 | InterPro:IPR023106 | InterPro:IPR036919 | InterPro:L30_ferredoxin-like_sf | UniProt:M0RQE3 | PFAM:PF00327 |
| PFAM:PF08079 | ScanProsite:PS00634 | PANTHER:PTHR11524 | PANTHER:PTHR11524:SF16 | InterPro:Ribosomal_L30_CS | InterPro:Ribosomal_L30_N |
| InterPro:Ribosomal_L30_central_dom_arc | InterPro:Ribosomal_L30_ferredoxin-like | InterPro:Ribosomal_L7_euk | InterPro:Ribosomal_L7_euk_arc | SUPFAM:SSF55129 | TIGRFAMs:TIGR01310 |
| UniParc:UPI0002954AA3 | SEG:seg | : | : | : | : |
Description
60S ribosomal protein L7-4 [Source:GMGC_GENE;Acc:GSMUA_Achr11G08130_001]
Coordinates
chr11:-:6300040..6301654
Molecular Weight (calculated)
28547.3 Da
IEP (calculated)
10.765
GRAVY (calculated)
-0.646
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEEAKAVV PESVLKKRKR EEQWALAKKQ ELDARKKKAR ENRKLIFGRA QQYAKEYESQ EKELIRLKRE ARMKGGFYVS PEAKLLFIIR IRGINAMHPK
101: TRKILQLLRL RQIFNGVFLK VNKATMNMLQ RVEPYVTYGY PNLKSVRELI YKRGYGKLNK QRIPLTDNLV VEQGLGKHGI ICVEDLVHEI MTVGPHFKEA
201: NNFLWPFKLK APLGGLKKKR NHYVEGGDAG NREDYINELI RRMN
101: TRKILQLLRL RQIFNGVFLK VNKATMNMLQ RVEPYVTYGY PNLKSVRELI YKRGYGKLNK QRIPLTDNLV VEQGLGKHGI ICVEDLVHEI MTVGPHFKEA
201: NNFLWPFKLK APLGGLKKKR NHYVEGGDAG NREDYINELI RRMN
001: MTEAESKTVV PESVLKKRKR EEEWALAKKQ ELEAAKKQNA EKRKLIFNRA KQYSKEYQEK ERELIQLKRE AKLKGGFYVD PEAKLLFIIR IRGINAIDPK
101: TKKILQLLRL RQIFNGVFLK VNKATINMLR RVEPYVTYGY PNLKSVKELI YKRGFGKLNH QRTALTDNSI VDQGLGKHGI ICVEDLIHEI MTVGPHFKEA
201: NNFLWPFQLK APLGGMKKKR NHYVEGGDAG NRENFINELV RRMN
101: TKKILQLLRL RQIFNGVFLK VNKATINMLR RVEPYVTYGY PNLKSVKELI YKRGFGKLNH QRTALTDNSI VDQGLGKHGI ICVEDLIHEI MTVGPHFKEA
201: NNFLWPFQLK APLGGMKKKR NHYVEGGDAG NRENFINELV RRMN
Arabidopsis Description
RPL7DRibosomal protein L30/L7 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VHA2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.