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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr2P08110_001
GSMUA_Achr6P25560_001
GSMUA_Achr9P08680_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G01250.1 GSMUA_Achr10P... AT4G09570.1 19130088
AT2G01250.1 GSMUA_Achr2P08110_001 AT4G09570.1 19130088
AT2G01250.1 GSMUA_Achr6P25560_001 AT4G09570.1 19130088
AT2G01250.1 GSMUA_Achr9P08680_001 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_00s2761g00010.t01 Wine grape cytosol 22.78 35.29
VIT_00s1526g00010.t01 Wine grape cytosol 24.05 35.19
VIT_00s2416g00010.t01 Wine grape cytosol 24.05 24.68
VIT_09s0054g00060.t01 Wine grape cytosol 29.11 18.7
CDY01953 Canola cytosol 30.38 16.78
VIT_09s0054g00090.t01 Wine grape cytosol 26.58 15.56
VIT_09s0054g00210.t01 Wine grape cytosol 29.11 15.44
VIT_09s0054g00190.t01 Wine grape cytosol 25.32 15.15
VIT_09s0054g00030.t01 Wine grape cytosol 26.58 13.82
CDX79781 Canola extracellular 27.85 13.75
GSMUA_Achr11P... Banana cytosol 39.24 12.7
GSMUA_Achr4P05780_001 Banana cytosol 37.97 12.3
GSMUA_Achr10P... Banana cytosol 36.71 11.89
Solyc07g008370.2.1 Tomato cytosol, nucleus, plastid, unclear 34.18 11.16
PGSC0003DMT400051218 Potato cytosol 34.18 11.16
PGSC0003DMT400075548 Potato cytosol 32.91 10.83
Bra000341.1-P Field mustard cytosol 26.58 10.71
GSMUA_Achr4P12660_001 Banana cytosol 39.24 10.69
PGSC0003DMT400053653 Potato cytosol 32.91 10.61
VIT_09s0054g00140.t01 Wine grape cytosol 24.05 10.22
VIT_11s0052g00290.t01 Wine grape cytosol 31.65 10.2
VIT_09s0054g00010.t01 Wine grape cytosol 31.65 10.16
GSMUA_Achr9P22960_001 Banana cytosol 31.65 10.12
CDY40393 Canola cytosol 30.38 9.92
AT2G01250.1 Thale cress cytosol 30.38 9.92
Bra014334.1-P Field mustard cytosol 30.38 9.92
Bra017461.1-P Field mustard cytosol 30.38 9.92
Bra024895.1-P Field mustard cytosol 30.38 9.92
CDX77810 Canola cytosol, extracellular 30.38 9.92
CDY17686 Canola cytosol 30.38 9.92
CDY25941 Canola cytosol 30.38 9.92
CDY37358 Canola cytosol 30.38 9.92
CDY41074 Canola cytosol 30.38 9.92
AT2G44120.2 Thale cress cytosol 30.38 9.72
CDY17884 Canola cytosol, extracellular 29.11 9.5
Bra037665.1-P Field mustard cytosol 29.11 9.5
Bra004806.1-P Field mustard cytosol 29.11 9.5
AT3G13580.3 Thale cress cytosol 29.11 9.43
CDX83440 Canola cytosol, extracellular 27.85 9.05
CDY30456 Canola cytosol 29.11 8.95
CDY23419 Canola extracellular 29.11 7.67
GSMUA_AchrUn_... Banana cytosol, mitochondrion 13.92 6.18
CDX95588 Canola cytosol 1.27 1.85
KRH25929 Soybean cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:GSMUA_AchrUn_randomP05030_001EnsemblPlants:GSMUA_AchrUn_randomT05030_001EnsemblPlantsGene:GSMUA_AchrUn_randomG05030_001GO:GO:0005575GO:GO:0016020GO:GO:0016021
TMHMM:TMhelixUniParc:UPI0002952EA4UniProt:M0U6G5MapMan:35.2::
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG05030_001]
Coordinates
chrchrUn_random:+:19835011..19838303
Molecular Weight (calculated)
9391.5 Da
IEP (calculated)
8.277
GRAVY (calculated)
-0.114
Length
79 amino acids
Sequence
(BLAST)
1: MCCCCFDDYH FRCHLEPSSM LRSNESQEKQ LIRLKREARM KGGDDCSPKA KLLFIICIRG WATPFLYPFN IYIVYYVIN
Best Arabidopsis Sequence Match ( AT3G13580.1 )
(BLAST)
001: MTEAESKTVV PESVLKKRKR EEEWALAKKQ ELEAAKKQNA EKRKLIFNRA KQYSKEYQEK ERELIQLKRE AKLKGGFYVD PEAKLLFIIR IRGINAIDPK
101: TKKILQLLRL RQIFNGVFLK VNKATINMLR RVEPYVTYGY PNLKSVKELI YKRGFGKLNH QRTALTDNSI VDQGLGKHGI ICVEDLIHEI MTVGPHFKEA
201: NNFLWPFQLK APLGGMKKKR NHYVEGGDAG NRENFINELV RRMN
Arabidopsis Description
RPL7DRibosomal protein L30/L7 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VHA2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.