Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
28052459
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX95588 | Canola | cytosol | 18.0 | 100.0 |
Bra037665.1-P | Field mustard | cytosol | 77.0 | 95.45 |
CDY17884 | Canola | cytosol, extracellular | 77.0 | 95.45 |
AT2G44120.2 | Thale cress | cytosol | 77.33 | 93.93 |
CDX83440 | Canola | cytosol, extracellular | 75.33 | 93.0 |
OQU75637 | Sorghum | cytosol | 16.67 | 92.59 |
CDY30456 | Canola | cytosol | 78.33 | 91.44 |
CDX77810 | Canola | cytosol, extracellular | 71.0 | 88.02 |
CDY17686 | Canola | cytosol | 71.0 | 88.02 |
CDY40393 | Canola | cytosol | 71.0 | 88.02 |
CDY25941 | Canola | cytosol | 70.67 | 87.6 |
CDY37358 | Canola | cytosol | 70.67 | 87.6 |
CDY41074 | Canola | cytosol | 70.67 | 87.6 |
VIT_00s2761g00010.t01 | Wine grape | cytosol | 14.33 | 84.31 |
PGSC0003DMT400075548 | Potato | cytosol | 67.33 | 84.17 |
VIT_09s0054g00140.t01 | Wine grape | cytosol | 51.67 | 83.33 |
KRH37351 | Soybean | endoplasmic reticulum | 67.0 | 83.06 |
Solyc07g008370.2.1 | Tomato | cytosol, nucleus, plastid, unclear | 66.67 | 82.64 |
PGSC0003DMT400051218 | Potato | cytosol | 66.67 | 82.64 |
KRH44630 | Soybean | cytosol | 66.67 | 82.3 |
KRH47287 | Soybean | nucleus | 66.67 | 82.3 |
VIT_09s0054g00010.t01 | Wine grape | cytosol | 66.67 | 81.3 |
PGSC0003DMT400053653 | Potato | cytosol | 65.67 | 80.41 |
VIT_11s0052g00290.t01 | Wine grape | cytosol | 65.67 | 80.41 |
VIT_00s1526g00010.t01 | Wine grape | cytosol | 14.33 | 79.63 |
Os04t0605900-01 | Rice | plastid | 63.33 | 77.87 |
TraesCS5A01G452400.1 | Wheat | nucleus | 63.0 | 77.46 |
TraesCS5B01G461300.1 | Wheat | cytosol | 63.0 | 77.46 |
TraesCS5D01G462800.1 | Wheat | cytosol, golgi | 63.0 | 77.46 |
Os08t0234000-01 | Rice | nucleus | 63.0 | 77.14 |
Zm00001d002395_P002 | Maize | cytosol, extracellular | 62.67 | 77.05 |
HORVU5Hr1G108990.2 | Barley | cytosol | 63.0 | 76.52 |
VIT_09s0054g00210.t01 | Wine grape | cytosol | 38.0 | 76.51 |
HORVU2Hr1G078780.1 | Barley | cytosol | 13.0 | 76.47 |
Zm00001d050193_P001 | Maize | cytosol, plasma membrane, plastid | 62.33 | 76.33 |
OQU75620 | Sorghum | cytosol | 62.33 | 76.33 |
KXG24783 | Sorghum | cytosol | 62.33 | 76.33 |
TraesCS2A01G432600.1 | Wheat | cytosol, unclear | 62.0 | 76.23 |
HORVU7Hr1G057320.1 | Barley | cytosol | 11.67 | 76.09 |
KXG27062 | Sorghum | cytosol | 59.33 | 76.07 |
Zm00001d026254_P001 | Maize | plastid | 62.33 | 76.02 |
TraesCS2B01G453900.1 | Wheat | cytosol, golgi, unclear | 61.67 | 75.82 |
VIT_09s0054g00060.t01 | Wine grape | cytosol | 31.0 | 75.61 |
TraesCS2D01G430500.1 | Wheat | golgi | 61.33 | 75.41 |
Zm00001d024373_P001 | Maize | cytosol | 61.33 | 74.49 |
KRH12348 | Soybean | endoplasmic reticulum, nucleus | 67.0 | 73.9 |
VIT_09s0054g00090.t01 | Wine grape | cytosol | 33.0 | 73.33 |
HORVU7Hr1G120140.1 | Barley | extracellular, peroxisome | 21.67 | 73.03 |
VIT_09s0054g00030.t01 | Wine grape | cytosol | 37.0 | 73.03 |
Zm00001d030114_P001 | Maize | cytosol | 60.33 | 71.83 |
HORVU6Hr1G079960.1 | Barley | cytosol, extracellular | 22.0 | 68.04 |
CDY01953 | Canola | cytosol | 31.67 | 66.43 |
Zm00001d041838_P003 | Maize | mitochondrion | 27.33 | 65.6 |
HORVU2Hr1G100970.4 | Barley | mitochondrion | 63.67 | 65.41 |
KRH25929 | Soybean | cytosol | 18.33 | 63.22 |
VIT_00s2416g00010.t01 | Wine grape | cytosol | 15.67 | 61.04 |
KXG27000 | Sorghum | plastid | 55.0 | 58.93 |
OQU80131 | Sorghum | cytosol | 64.67 | 58.43 |
VIT_09s0054g00190.t01 | Wine grape | cytosol | 24.0 | 54.55 |
CDX79781 | Canola | extracellular | 28.33 | 53.12 |
CDX79356 | Canola | cytosol | 32.67 | 38.13 |
CDY53223 | Canola | cytosol | 33.0 | 37.64 |
CDX67965 | Canola | cytosol | 33.0 | 37.5 |
CDY66947 | Canola | cytosol | 32.67 | 37.26 |
CDX67964 | Canola | cytosol | 19.33 | 32.4 |
GSMUA_AchrUn_... | Banana | cytosol | 7.67 | 29.11 |
HORVU5Hr1G109020.1 | Barley | extracellular | 6.67 | 27.03 |
Protein Annotations
Gene3D:1.10.15.30 | MapMan:17.1.2.1.5 | Gene3D:3.30.1390.20 | GO:A0A078GDG3 | UniProt:A0A078GDG3 | EnsemblPlants:CDY23419 |
ProteinID:CDY23419 | ProteinID:CDY23419.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
EnsemblPlantsGene:GSBRNA2T00022028001 | InterPro:IPR023106 | InterPro:IPR036919 | InterPro:L30_ferredoxin-like_sf | PFAM:PF00327 | PFAM:PF08079 |
ScanProsite:PS00634 | PANTHER:PTHR11524 | PANTHER:PTHR11524:SF16 | InterPro:Ribosomal_L30_CS | InterPro:Ribosomal_L30_N | InterPro:Ribosomal_L30_central_dom_arc |
InterPro:Ribosomal_L30_ferredoxin-like | InterPro:Ribosomal_L7_euk | InterPro:Ribosomal_L7_euk_arc | SUPFAM:SSF55129 | TIGRFAMs:TIGR01310 | TMHMM:TMhelix |
UniParc:UPI0004EF3578 | SEG:seg | : | : | : | : |
Description
BnaC04g49470DBnaC04g49470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDG3]
Coordinates
chrLK032143:-:356139..360105
Molecular Weight (calculated)
34659.2 Da
IEP (calculated)
10.337
GRAVY (calculated)
-0.229
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPYISLLLP LFLFFICLLI NGPLKEGYEL KTLNPFLLLL PLCAVPLSLR QYLPLKEEMA ESKVVVPESV LKKIKREEEW ALAKKQEAEA AKKKSVETRK
101: LIFKRAEQYA KEYAEKDNEL IRLKREAKLK GGFYVDPEAK LLFIIRIRGI NAIDPKTKKI LQLLRLRQIF NGVFLKVNKA TINMLRRVEP YVTYGYPNLK
201: TVKELIYKRG FGKLNHQRIA LTDNSIVSEG LGKHNIICVE DLIHEIMTVG PHFKEANNFL WPFQLKAPLG GLKKKRNHYV EGGDAGNREN FINELVRRMN
101: LIFKRAEQYA KEYAEKDNEL IRLKREAKLK GGFYVDPEAK LLFIIRIRGI NAIDPKTKKI LQLLRLRQIF NGVFLKVNKA TINMLRRVEP YVTYGYPNLK
201: TVKELIYKRG FGKLNHQRIA LTDNSIVSEG LGKHNIICVE DLIHEIMTVG PHFKEANNFL WPFQLKAPLG GLKKKRNHYV EGGDAGNREN FINELVRRMN
001: MYVGEMAESK VVVPESVLKK IKRQEEWALA KKDEAVAAKK KSVEARKLIF KRAEQYAKEY AEKDNELIRL KREAKLKGGF YVDPEAKLLF IIRIRGINAI
101: DPKTKKILQL LRLRQIFNGV FLKVNKATVN MLRRVEPYVT YGYPNLKSVK ELIYKRGYGK LNHQRIALTD NSIVDQALGK HGIICVEDLI HEIMTVGPHF
201: KEANNFLWPF QLKAPLGGLK KKRNHYVEGG DAGNRENFIN ELVRRMN
101: DPKTKKILQL LRLRQIFNGV FLKVNKATVN MLRRVEPYVT YGYPNLKSVK ELIYKRGYGK LNHQRIALTD NSIVDQALGK HGIICVEDLI HEIMTVGPHF
201: KEANNFLWPF QLKAPLGGLK KKRNHYVEGG DAGNRENFIN ELVRRMN
Arabidopsis Description
Ribosomal protein L30/L7 family protein [Source:UniProtKB/TrEMBL;Acc:F4IT48]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.