CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003583.1-P	Field mustard	cytosol	99.24	99.24
CDX79356	Canola	cytosol	89.77	92.22
CDY53223	Canola	cytosol	88.64	88.97
CDX67964	Canola	cytosol	60.23	88.83
CDY66947	Canola	cytosol	88.26	88.59
AT1G80750.1	Thale cress	cytosol	79.55	85.02
KRH06635	Soybean	cytosol	50.76	56.78
VIT_09s0070g00130.t01	Wine grape	cytosol	52.65	56.5
KRG94901	Soybean	nucleus	50.38	56.36
PGSC0003DMT400036807	Potato	cytosol	50.0	53.66
PGSC0003DMT400073431	Potato	cytosol	49.62	53.25
Solyc06g068400.2.1	Tomato	cytosol, nucleus	49.24	52.85
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	34.85	51.69
TraesCS7A01G266000.1	Wheat	nucleus	43.18	45.97
TraesCS7B01G166400.1	Wheat	cytosol	43.18	45.97
TraesCS7D01G268700.1	Wheat	cytosol	42.8	45.56
Os08t0542100-01	Rice	nucleus	47.35	45.45
Solyc03g117060.2.1	Tomato	nucleus	51.52	45.33
CDY25941	Canola	cytosol	39.39	42.98
CDY37358	Canola	cytosol	39.39	42.98
CDY40393	Canola	cytosol	39.39	42.98
CDY17686	Canola	cytosol	39.39	42.98
CDX77810	Canola	cytosol, extracellular	39.39	42.98
CDX95588	Canola	cytosol	8.71	42.59
EES15262	Sorghum	cytosol	42.05	42.37
CDY41074	Canola	cytosol	38.64	42.15
Zm00001d031703_P001	Maize	cytosol, plasma membrane	41.67	41.98
Zm00001d052719_P002	Maize	cytosol	41.67	41.98
CDY17884	Canola	cytosol, extracellular	37.12	40.5
CDX83440	Canola	cytosol, extracellular	36.36	39.51
CDY30456	Canola	cytosol	37.5	38.52
TraesCS1D01G134300.1	Wheat	cytosol	30.68	33.61
CDY23419	Canola	extracellular	37.5	33.0
CDY01953	Canola	cytosol	15.53	28.67
CDX79781	Canola	extracellular	11.74	19.38

Protein Annotations

EnsemblPlants:CDX67965	EnsemblPlantsGene:GSBRNA2T00099177001	Gene3D:1.10.15.30	Gene3D:3.30.1390.20	InterPro:IPR023106	InterPro:IPR036919
InterPro:L30_ferredoxin-like_sf	InterPro:Ribosomal_L30_N	InterPro:Ribosomal_L30_central_dom_arc	InterPro:Ribosomal_L30_ferredoxin-like	InterPro:Ribosomal_L7_euk	InterPro:Ribosomal_L7_euk_arc
PANTHER:PTHR11524	PANTHER:PTHR11524:SF11	PFAM:PF00327	PFAM:PF08079	ProteinID:CDX67965	ProteinID:CDX67965.1
SEG:seg	SUPFAM:SSF55129	TIGRFAMs:TIGR01310	UniParc:UPI0004EF3A08	MapMan:17.1.2.1.5	:

Description

BnaA07g20050D

Coordinates

chrLK031787:+:3130194..3131777

Molecular Weight (calculated)

29986.9 Da

IEP (calculated)

10.326

GRAVY (calculated)

-0.462

Length

264 amino acids

Sequence
(BLAST)

001: MAGEEAKVVA VEEPKVMAVE EEAKGLDYIP EVILKKRKNR DELAFIRKKQ LELGNFGKKK KKVADIKRPE DFVLEFRAKE IDLIRMKQRV KRPRATPPPV
101: KSNLVFIIRI QGKNDMHTKT KKVLNSMQLR STFTGVFAKA TDGLFQKLLK VQPYVTYGYP NGKSVKDLIF KKGYTIIEGN PVPLTDNNII EQALGEHGIF
201: CIEDIVNEIA RVGDHFREVM RFLGPLKLNK PEAGVLHGKK QVFSDGGDTG NREDKINDLI IKMN

Best Arabidopsis Sequence Match ( AT1G80750.1 )
(BLAST)

001: MAEEEAKGLD YIPEIVLKKR KNRDELAFIR KKQLELGNSG KKKKKVSDIK RPEDFVHEFR AKEVDMIRMK QRVKRPKSSP PPVKSDLVFI IRIQGKNDMH
101: PKTKRILNNL QLKSVFTGVF AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH KILGIEDLVN EIARVGDHFR
201: EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN DLISKMN

Arabidopsis Description

RPL7A60S ribosomal protein L7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.