Factsheet for Bra003583.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67965	Canola	cytosol	99.24	99.24
CDX79356	Canola	cytosol	89.77	92.22
Bra008443.1-P	Field mustard	cytosol	87.5	87.83
CDX67964	Canola	cytosol	59.47	87.71
AT1G80750.1	Thale cress	cytosol	79.55	85.02
KRH06635	Soybean	cytosol	50.76	56.78
VIT_09s0070g00130.t01	Wine grape	cytosol	52.65	56.5
KRG94901	Soybean	nucleus	50.38	56.36
PGSC0003DMT400036807	Potato	cytosol	50.0	53.66
PGSC0003DMT400073431	Potato	cytosol	49.62	53.25
Solyc06g068400.2.1	Tomato	cytosol, nucleus	49.24	52.85
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	34.85	51.69
TraesCS7B01G166400.1	Wheat	cytosol	43.18	45.97
TraesCS7A01G266000.1	Wheat	nucleus	43.18	45.97
TraesCS7D01G268700.1	Wheat	cytosol	42.8	45.56
Solyc03g117060.2.1	Tomato	nucleus	51.52	45.33
Os08t0542100-01	Rice	nucleus	46.97	45.09
Bra024895.1-P	Field mustard	cytosol	39.77	43.39
Bra014334.1-P	Field mustard	cytosol	39.39	42.98
Bra017461.1-P	Field mustard	cytosol	39.02	42.56
EES15262	Sorghum	cytosol	42.05	42.37
Zm00001d031703_P001	Maize	cytosol, plasma membrane	41.67	41.98
Zm00001d052719_P002	Maize	cytosol	41.67	41.98
Bra037665.1-P	Field mustard	cytosol	37.5	40.91
Bra004806.1-P	Field mustard	cytosol	37.12	40.5
Bra000341.1-P	Field mustard	cytosol	28.79	38.78
TraesCS1D01G134300.1	Wheat	cytosol	30.68	33.61

Protein Annotations

EnsemblPlants:Bra003583.1	EnsemblPlants:Bra003583.1-P	EnsemblPlantsGene:Bra003583	Gene3D:1.10.15.30	Gene3D:3.30.1390.20	InterPro:IPR023106
InterPro:IPR036919	InterPro:L30_ferredoxin-like_sf	InterPro:Ribosomal_L30_N	InterPro:Ribosomal_L30_central_dom_arc	InterPro:Ribosomal_L30_ferredoxin-like	InterPro:Ribosomal_L7_euk
InterPro:Ribosomal_L7_euk_arc	PANTHER:PTHR11524	PANTHER:PTHR11524:SF11	PFAM:PF00327	PFAM:PF08079	SEG:seg
SUPFAM:SSF55129	TIGRFAMs:TIGR01310	UniParc:UPI000254135F	UniProt:M4CHA0	MapMan:17.1.2.1.5	:

Description

AT1G80750 (E=2e-119) | 60S ribosomal protein L7 (RPL7A)

Coordinates

chrA07:+:13921222..13922448

Molecular Weight (calculated)

30002.0 Da

IEP (calculated)

10.416

GRAVY (calculated)

-0.473

Length

264 amino acids

Sequence
(BLAST)

001: MSGKEAKVVA VEEPKVMAVE EEAKGLDYIP EVILKKRKNR DELAFIRKKQ LELGNFGKKK KKVADIKRPE DFVLEFRAKE IDLIRMKQRV KRPRATPPPV
101: KSNLVFIIRI QGKNDMHTKT KKVLNSMQLR STFTGVFAKA TDGLFQKLLK VQPYVTYGYP NGKSVKDLIF KKGYTIIEGN PVPLTDNNII EQALGEHGIF
201: CIEDIVNEIA RVGDHFREVM RFLGPLKLNK PEAGVLHGKK QVFSDGGDTG NREDKINDLI IKMN

Best Arabidopsis Sequence Match ( AT1G80750.1 )
(BLAST)

001: MAEEEAKGLD YIPEIVLKKR KNRDELAFIR KKQLELGNSG KKKKKVSDIK RPEDFVHEFR AKEVDMIRMK QRVKRPKSSP PPVKSDLVFI IRIQGKNDMH
101: PKTKRILNNL QLKSVFTGVF AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH KILGIEDLVN EIARVGDHFR
201: EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN DLISKMN

Arabidopsis Description

RPL7A60S ribosomal protein L7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.