CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67965	Canola	cytosol	88.83	60.23
Bra003583.1-P	Field mustard	cytosol	87.71	59.47
CDX79356	Canola	cytosol	74.86	52.14
CDY53223	Canola	cytosol	76.54	52.09
CDY66947	Canola	cytosol	75.98	51.71
AT1G80750.1	Thale cress	cytosol	68.72	49.8
KRH06635	Soybean	cytosol	43.58	33.05
KRG94901	Soybean	nucleus	41.9	31.78
PGSC0003DMT400036807	Potato	cytosol	42.46	30.89
Solyc06g068400.2.1	Tomato	cytosol, nucleus	41.34	30.08
PGSC0003DMT400073431	Potato	cytosol	41.34	30.08
VIT_09s0070g00130.t01	Wine grape	cytosol	40.78	29.67
CDY01953	Canola	cytosol	21.79	27.27
Solyc03g117060.2.1	Tomato	nucleus	43.02	25.67
Os08t0542100-01	Rice	nucleus	37.99	24.73
TraesCS7B01G166400.1	Wheat	cytosol	34.08	24.6
TraesCS7A01G266000.1	Wheat	nucleus	34.08	24.6
TraesCS7D01G268700.1	Wheat	cytosol	33.52	24.19
CDY41074	Canola	cytosol	31.28	23.14
CDY40393	Canola	cytosol	31.28	23.14
CDY37358	Canola	cytosol	31.28	23.14
CDY25941	Canola	cytosol	31.28	23.14
CDY17686	Canola	cytosol	31.28	23.14
CDX77810	Canola	cytosol, extracellular	31.28	23.14
EES15262	Sorghum	cytosol	33.52	22.9
CDY17884	Canola	cytosol, extracellular	30.73	22.73
CDX83440	Canola	cytosol, extracellular	30.73	22.63
Zm00001d031703_P001	Maize	cytosol, plasma membrane	32.96	22.52
TraesCS1D01G134300.1	Wheat	cytosol	30.17	22.41
CDY30456	Canola	cytosol	31.28	21.79
Zm00001d052719_P002	Maize	cytosol	31.84	21.76
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	21.23	21.35
CDX79781	Canola	extracellular	17.32	19.38
CDY23419	Canola	extracellular	32.4	19.33
CDX95588	Canola	cytosol	2.79	9.26

Protein Annotations

EnsemblPlants:CDX67964	EnsemblPlantsGene:GSBRNA2T00099176001	Gene3D:3.30.1390.20	InterPro:IPR036919	InterPro:L30_ferredoxin-like_sf	InterPro:Ribosomal_L30_N
InterPro:Ribosomal_L30_ferredoxin-like	PANTHER:PTHR11524	PANTHER:PTHR11524:SF11	PFAM:PF00327	PFAM:PF08079	ProteinID:CDX67964
ProteinID:CDX67964.1	SEG:seg	SUPFAM:SSF55129	UniParc:UPI0004EDCADF	MapMan:35.1	:

Description

BnaA07g20040D

Coordinates

chrLK031787:+:3128705..3130129

Molecular Weight (calculated)

20705.7 Da

IEP (calculated)

10.659

GRAVY (calculated)

-0.555

Length

179 amino acids

Sequence
(BLAST)

001: MAGEEAKVVA VEEPKVMAVE EEAKGLDYIP EVILKKRKNR DELAFIRKKQ LELGNFGKKK KKVADIKRPE DFVLEFRAKE IDLIRMKQRV KRPRATPPPV
101: KSNLVFIIRI QGKNDMHPKT KKVLNSMQLR STFTGVFAKA TDGLFQKLLK VQPYVTYGPI SPYMVGLEPR FYKFDPDRN

Best Arabidopsis Sequence Match ( AT1G80750.1 )
(BLAST)

001: MAEEEAKGLD YIPEIVLKKR KNRDELAFIR KKQLELGNSG KKKKKVSDIK RPEDFVHEFR AKEVDMIRMK QRVKRPKSSP PPVKSDLVFI IRIQGKNDMH
101: PKTKRILNNL QLKSVFTGVF AKATDSLFQK LLKVQPYVTY GYPNDKSVKD LIYKKGCTII EGNPVPLTDN NIIEQALGEH KILGIEDLVN EIARVGDHFR
201: EVMRFLGPLK LNKPVADVLH RKKQVFSEGG DTGNREDKIN DLISKMN

Arabidopsis Description

RPL7A60S ribosomal protein L7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.