Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s2761g00010.t01 | Wine grape | cytosol | 29.37 | 82.35 |
| VIT_00s1526g00010.t01 | Wine grape | cytosol | 29.37 | 77.78 |
| HORVU2Hr1G078780.1 | Barley | cytosol | 26.57 | 74.51 |
| VIT_09s0054g00060.t01 | Wine grape | cytosol | 46.15 | 53.66 |
| VIT_00s2416g00010.t01 | Wine grape | cytosol | 28.67 | 53.25 |
| VIT_09s0054g00190.t01 | Wine grape | cytosol | 46.85 | 50.76 |
| CDX79781 | Canola | extracellular | 56.64 | 50.62 |
| CDX77810 | Canola | cytosol, extracellular | 78.32 | 46.28 |
| CDY17686 | Canola | cytosol | 78.32 | 46.28 |
| CDY37358 | Canola | cytosol | 77.62 | 45.87 |
| CDY40393 | Canola | cytosol | 77.62 | 45.87 |
| CDY25941 | Canola | cytosol | 76.92 | 45.45 |
| CDY41074 | Canola | cytosol | 76.92 | 45.45 |
| VIT_09s0054g00210.t01 | Wine grape | cytosol | 46.85 | 44.97 |
| HORVU7Hr1G120140.1 | Barley | extracellular, peroxisome | 26.57 | 42.7 |
| Bra004806.1-P | Field mustard | cytosol | 70.63 | 41.74 |
| CDY17884 | Canola | cytosol, extracellular | 70.63 | 41.74 |
| HORVU6Hr1G079960.1 | Barley | cytosol, extracellular | 27.97 | 41.24 |
| VIT_09s0054g00030.t01 | Wine grape | cytosol | 43.36 | 40.79 |
| CDX83440 | Canola | cytosol, extracellular | 67.13 | 39.51 |
| CDY30456 | Canola | cytosol | 70.63 | 39.3 |
| KRH47287 | Soybean | nucleus | 65.03 | 38.27 |
| VIT_09s0054g00090.t01 | Wine grape | cytosol | 35.66 | 37.78 |
| KRH44630 | Soybean | cytosol | 63.64 | 37.45 |
| AT2G44120.2 | Thale cress | cytosol | 64.34 | 37.25 |
| PGSC0003DMT400051218 | Potato | cytosol | 62.94 | 37.19 |
| Solyc07g008370.2.1 | Tomato | cytosol, nucleus, plastid, unclear | 62.94 | 37.19 |
| VIT_11s0052g00290.t01 | Wine grape | cytosol | 63.64 | 37.14 |
| PGSC0003DMT400075548 | Potato | cytosol | 61.54 | 36.67 |
| VIT_09s0054g00010.t01 | Wine grape | cytosol | 62.24 | 36.18 |
| KRH37351 | Soybean | endoplasmic reticulum | 59.44 | 35.12 |
| PGSC0003DMT400053653 | Potato | cytosol | 60.14 | 35.1 |
| Zm00001d002395_P002 | Maize | cytosol, extracellular | 55.24 | 32.38 |
| KXG24783 | Sorghum | cytosol | 55.24 | 32.24 |
| OQU75620 | Sorghum | cytosol | 55.24 | 32.24 |
| Zm00001d026254_P001 | Maize | plastid | 55.24 | 32.11 |
| TraesCS5B01G461300.1 | Wheat | cytosol | 54.55 | 31.97 |
| TraesCS5A01G452400.1 | Wheat | nucleus | 54.55 | 31.97 |
| Os04t0605900-01 | Rice | plastid | 54.55 | 31.97 |
| Zm00001d050193_P001 | Maize | cytosol, plasma membrane, plastid | 54.55 | 31.84 |
| Os08t0234000-01 | Rice | nucleus | 54.55 | 31.84 |
| CDY23419 | Canola | extracellular | 66.43 | 31.67 |
| KRH12348 | Soybean | endoplasmic reticulum, nucleus | 60.14 | 31.62 |
| Zm00001d024373_P001 | Maize | cytosol | 54.55 | 31.58 |
| HORVU5Hr1G108990.2 | Barley | cytosol | 54.55 | 31.58 |
| TraesCS2A01G432600.1 | Wheat | cytosol, unclear | 53.85 | 31.56 |
| TraesCS5D01G462800.1 | Wheat | cytosol, golgi | 53.85 | 31.56 |
| TraesCS2B01G453900.1 | Wheat | cytosol, golgi, unclear | 53.15 | 31.15 |
| TraesCS2D01G430500.1 | Wheat | golgi | 53.15 | 31.15 |
| Zm00001d030114_P001 | Maize | cytosol | 54.55 | 30.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.78 | 30.38 |
| KXG27062 | Sorghum | cytosol | 48.95 | 29.91 |
| HORVU7Hr1G057320.1 | Barley | cytosol | 8.39 | 26.09 |
| HORVU2Hr1G100970.4 | Barley | mitochondrion | 53.15 | 26.03 |
| OQU80131 | Sorghum | cytosol | 55.24 | 23.8 |
| VIT_09s0054g00140.t01 | Wine grape | cytosol | 30.07 | 23.12 |
| CDX67964 | Canola | cytosol | 27.27 | 21.79 |
| KXG27000 | Sorghum | plastid | 38.46 | 19.64 |
| CDX79356 | Canola | cytosol | 29.37 | 16.34 |
| CDY66947 | Canola | cytosol | 29.37 | 15.97 |
| CDY53223 | Canola | cytosol | 29.37 | 15.97 |
| CDX67965 | Canola | cytosol | 28.67 | 15.53 |
| CDX95588 | Canola | cytosol | 2.1 | 5.56 |
| OQU75637 | Sorghum | cytosol | 2.1 | 5.56 |
| Zm00001d041838_P003 | Maize | mitochondrion | 4.2 | 4.8 |
| HORVU5Hr1G109020.1 | Barley | extracellular | 2.1 | 4.05 |
| KRH25929 | Soybean | cytosol | 0.7 | 1.15 |
Protein Annotations
| EnsemblPlants:CDY01953 | EnsemblPlantsGene:GSBRNA2T00113235001 | GO:A0A078EQZ5 | InterPro:IPR036919 | InterPro:L30_ferredoxin-like_sf | InterPro:Ribosomal_L30_N |
| InterPro:Ribosomal_L30_ferredoxin-like | ncoils:Coil | PANTHER:PTHR11524 | PANTHER:PTHR11524:SF16 | PFAM:PF00327 | PFAM:PF08079 |
| ProteinID:CDY01953 | ProteinID:CDY01953.1 | SEG:seg | SUPFAM:SSF55129 | TMHMM:TMhelix | UniParc:UPI0004EE4D86 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC02g27740D
Coordinates
chrLK031930:+:768340..768952
Molecular Weight (calculated)
16584.7 Da
IEP (calculated)
10.476
GRAVY (calculated)
-0.210
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESKVVVPE SVLKKRKREE EWALAKKQSA EAAKKTNAAN RKLIYKRAEQ YAKEYAEKEK ELISLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK
101: KILQLLRLRQ IRQLYSSCIV WSCIDHITTF LCAFLICVAV IMR
101: KILQLLRLRQ IRQLYSSCIV WSCIDHITTF LCAFLICVAV IMR
001: MVESKVVVPE SVLKKRKREE EWALEKKQNV EAAKKKNAEN RKLIFKRAEQ YSKEYAEKEK ELISLKREAK LKGGFYVDPE AKLLFIIRIR GINAIDPKTK
101: KILQLLRLRQ IFNGVFLKVN KATMNMLRRV EPYVTYGFPN LKSVKELIYK RGYGKLNHQR IALTDNSIVE QALGKHGIIC TEDLIHEILT VGPHFKEANN
201: FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELIRR MN
101: KILQLLRLRQ IFNGVFLKVN KATMNMLRRV EPYVTYGFPN LKSVKELIYK RGYGKLNHQR IALTDNSIVE QALGKHGIIC TEDLIHEILT VGPHFKEANN
201: FLWPFQLKAP LGGLKKKRNH YVEGGDAGNR ENFINELIRR MN
Arabidopsis Description
RPL7B60S ribosomal protein L7-2 [Source:UniProtKB/Swiss-Prot;Acc:P60040]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.