Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0054g00230.t01 | Wine grape | cytosol | 53.61 | 15.16 |
| VIT_09s0054g00370.t01 | Wine grape | golgi, mitochondrion | 56.7 | 9.57 |
| VIT_10s0003g03280.t01 | Wine grape | cytosol | 37.11 | 5.63 |
| VIT_17s0000g07760.t01 | Wine grape | extracellular, golgi | 29.9 | 5.06 |
| VIT_05s0020g04650.t01 | Wine grape | endoplasmic reticulum | 24.74 | 3.52 |
| VIT_11s0052g00140.t01 | Wine grape | golgi, mitochondrion | 8.25 | 1.59 |
| GSMUA_Achr4P12690_001 | Banana | mitochondrion | 0.0 | 0.0 |
| VIT_09s0054g00310.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00510+3.2.1.113 | KEGG:00513+3.2.1.113 | Gene3D:1.50.10.10 | MapMan:35.1 | InterPro:6hp_glycosidase-like_sf | ProteinID:CCB44686 |
| ProteinID:CCB44686.1 | UniProt:F6GXK0 | EMBL:FN594964 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004571 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016787 | InterPro:Glyco_hydro_47 |
| InterPro:IPR012341 | PFAM:PF01532 | PANTHER:PTHR11742 | PANTHER:PTHR11742:SF42 | SUPFAM:SSF48225 | InterPro:Seven-hairpin_glycosidases |
| UniParc:UPI00021091FC | ArrayExpress:VIT_11s0052g00150 | EnsemblPlantsGene:VIT_11s0052g00150 | EnsemblPlants:VIT_11s0052g00150.t01 | : | : |
Description
No Description!
Coordinates
chr11:+:17207816..17211881
Molecular Weight (calculated)
11145.6 Da
IEP (calculated)
7.440
GRAVY (calculated)
0.075
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MANVCLRMSV SVGCVLICFK VNTGIKDNMM QSFFLAETLK YLYLLFSPPS VIPLDEWVFN TEAHPFRIVT RHDHEENFGA LGQQKPQVLT KTQPNWI
001: MIHAWSSYEK YAWGKDELQP RTKDGTDSFG GLGATMVDSL DTLYIMGLDE QFQKAREWVA SSLDFDKDYD ASMFETTIRV VGGLLSAYDL SGDKMFLEKA
101: KDIADRLLPA WNTPTGIPYN IINLRNGNAH NPSWAAGGDS ILADSGTEQL EFIALSQRTG DPKYQQKVEK VITELNKNFP ADGLLPIYIN PDNANPSYST
201: TTFGAMGDSF YEYLLKVWVQ GNKTSAVKPY RDMWEKSMKG LLSLVKKSTP SSFTYICEKN GNNLIDKMDE LACFAPGMLA LGASGYGPDE EKKFLSLAGE
301: LAWTCYNFYQ STPTKLAGEN YFFTAGQDMS VGTSWNILRP ETVESLFYLW RLTGNKTYQE WGWNIFQAFE KNSRVESGYV GLKDVNTGAK DNKMQSFFLA
401: ETLKYLYLLF SPSSVISLDE WVFNTEAHPL KIVARNDPRK PTIALRQRKF GHQINV
101: KDIADRLLPA WNTPTGIPYN IINLRNGNAH NPSWAAGGDS ILADSGTEQL EFIALSQRTG DPKYQQKVEK VITELNKNFP ADGLLPIYIN PDNANPSYST
201: TTFGAMGDSF YEYLLKVWVQ GNKTSAVKPY RDMWEKSMKG LLSLVKKSTP SSFTYICEKN GNNLIDKMDE LACFAPGMLA LGASGYGPDE EKKFLSLAGE
301: LAWTCYNFYQ STPTKLAGEN YFFTAGQDMS VGTSWNILRP ETVESLFYLW RLTGNKTYQE WGWNIFQAFE KNSRVESGYV GLKDVNTGAK DNKMQSFFLA
401: ETLKYLYLLF SPSSVISLDE WVFNTEAHPL KIVARNDPRK PTIALRQRKF GHQINV
Arabidopsis Description
MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.