Factsheet for VIT_17s0000g07760.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

nucleus 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 5
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	extracellular, mitochondrion, plasma membrane, plastid, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	40.66	81.75
KRH03356	Soybean	endoplasmic reticulum, golgi	80.28	80.42
Solyc03g113900.2.1	Tomato	golgi	77.84	77.16
AT1G27520.1	Thale cress	golgi	75.92	75.78
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	14.14	75.7
PGSC0003DMT400062874	Potato	cytosol	38.74	75.51
PGSC0003DMT400062870	Potato	golgi, plasma membrane	37.0	74.65
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	73.12	73.38
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	73.12	73.38
TraesCS6D01G289200.1	Wheat	endoplasmic reticulum	71.2	70.34
EES05547	Sorghum	endoplasmic reticulum, golgi	71.03	70.29
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	71.2	70.22
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	71.03	70.17
Os02t0741300-01	Rice	mitochondrion	71.38	69.91
HORVU6Hr1G076440.3	Barley	extracellular, plastid	67.36	69.8
KRH57025	Soybean	extracellular	24.26	68.47
CDX84922	Canola	cytosol	74.0	65.23
Zm00001d017997_P010	Maize	golgi	65.79	64.33
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	38.39	32.26
VIT_11s0052g00150.t01	Wine grape	extracellular, golgi, vacuole	5.06	29.9
VIT_09s0054g00230.t01	Wine grape	cytosol	14.31	23.91
VIT_09s0054g00370.t01	Wine grape	golgi, mitochondrion	23.73	23.65
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	19.37	22.11
VIT_10s0003g03280.t01	Wine grape	cytosol	23.04	20.66
VIT_09s0054g00310.t01	Wine grape	cytosol	3.32	20.65

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	EntrezGene:100245051	wikigene:100245051	MapMan:19.1.1.1.4
InterPro:6hp_glycosidase-like_sf	ProteinID:CBI15084	ProteinID:CBI15084.3	UniProt:D7SHX4	EMBL:FN594950	GO:GO:0000139
GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006491
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798
GO:GO:0019538	InterPro:Glyco_hydro_47	InterPro:IPR012341	EntrezGene:LOC100245051	wikigene:LOC100245051	PFAM:PF01532
PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF44	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM
UniParc:UPI0001985116	ArrayExpress:VIT_17s0000g07760	EnsemblPlantsGene:VIT_17s0000g07760	EnsemblPlants:VIT_17s0000g07760.t01	RefSeq:XP_002280345	RefSeq:XP_002280345.1
SEG:seg	:	:	:	:	:

Description

alpha-1,2-Mannosidase [Source:UniProtKB/TrEMBL;Acc:D7SHX4]

Coordinates

chr17:+:8732802..8739625

Molecular Weight (calculated)

65288.6 Da

IEP (calculated)

6.111

GRAVY (calculated)

-0.215

Length

573 amino acids

Sequence
(BLAST)

001: MFSPNFGTWV LMFLLVSSTF VHSSMSEIDA KKRYMREKVR KMFYHAYDNY MAHAFPHDEL KPLSKTFTDS LSELGNLNLE HLSEHYNGSA LTLIESLSSL
101: VILGNNTEFE RAVRWLSENL SFDVDVRTNL FECNIRVLGG LVSAHILATD SRNRLVQGTY KNELLILAED LGRRFLPAFD TPTGLPYAWI NLKYGVMENE
201: TTETSTSGCG SLILEMGALS RLTGDPRYES AALRALRKLW SMRSSLNLLG TTLDVATGEW IEYSSGIGAG VDSFYEYLIK AHILFGKEEL WRMFQSAYLA
301: VQKYFRHGPW YHEADMRTGK ATYWQLTSLQ AFWPGVQVLI GDIAAANSSH REFVYVWEKF GVLPERYLLD HQMLHPTEKY YPLRPELAES TFYLYQATKD
401: PWYIEVGKSM VDSLNLYAKV EGGFASIKDV TTMQLEDHQH SFFLAETCKY LYLLFDDSFL VDRNYVFTTE GHPLPVISAW HDRLPENYIP TNGTSIKSEK
501: QAARRSSAMS LQVCPATTLN SGRSSQQVES ACHIPDAQSD HRCLTEDECG VDATTCRRRS CSMAGYCGLW LFI

Best Arabidopsis Sequence Match ( AT1G27520.1 )
(BLAST)

001: MSCPIHPRRL FLCLLISLTF FVVDPSSQHI EVKKKQMREK VREMFYHAYD NYMTYAFPHD ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS
101: SLAILGNSTE FEKGVLWLSE NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPNNRLIQG SYNNQLLRLA EDLGKRFLPA FETPTGLPYA WINLKNGVME
201: NETTETSTSG CGSLVLEMGA LSRLTGDPRF ESAALRALRQ LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFHSAY
301: LASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT
401: KDPWYLDVGE SMVKSLNLYT KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS SWHEKLPETY FSGNWTLSKS
501: GAWESRASAL SLQVCPLISL NSRHPEQQRE SACHVLDEQI NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL

Arabidopsis Description

MNS5Alpha-mannosidase I MNS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXC9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.