Factsheet for PGSC0003DMT400062870

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	70.77	70.53
KRH57025	Soybean	extracellular	47.54	66.5
Solyc03g113900.2.1	Tomato	golgi	86.27	42.39
VIT_17s0000g07760.t01	Wine grape	extracellular, golgi	74.65	37.0
AT1G27520.1	Thale cress	golgi	71.48	35.37
KRH03356	Soybean	endoplasmic reticulum, golgi	70.42	34.97
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	69.37	34.5
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	69.01	34.33
TraesCS6D01G289200.1	Wheat	endoplasmic reticulum	68.66	33.62
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	68.66	33.56
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	67.96	33.28
EES05547	Sorghum	endoplasmic reticulum, golgi	67.61	33.16
Os02t0741300-01	Rice	mitochondrion	67.96	32.99
HORVU6Hr1G076440.3	Barley	extracellular, plastid	61.97	31.83
CDX84922	Canola	cytosol	69.01	30.15
Zm00001d017997_P010	Maize	golgi	59.51	28.84
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	1.06	2.8
PGSC0003DMT400023755	Potato	cytosol	1.06	1.15
PGSC0003DMT400062874	Potato	cytosol	1.06	1.02
PGSC0003DMT400041971	Potato	extracellular, golgi	1.06	0.96

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:50.3.2	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_47
InterPro:IPR012341	UniProt:M1C9P2	PFAM:PF01532	EnsemblPlantsGene:PGSC0003DMG401024473	PGSC:PGSC0003DMG401024473	EnsemblPlants:PGSC0003DMT400062870
PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF44	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix
UniParc:UPI000294DC4B	SEG:seg	:	:	:	:

Description

Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA [Source:PGSC_GENE;Acc:PGSC0003DMG401024473]

Coordinates

chr3:+:53730836..53733876

Molecular Weight (calculated)

31924.9 Da

IEP (calculated)

6.515

GRAVY (calculated)

0.150

Length

284 amino acids

Sequence
(BLAST)

001: MFQATVVKWI LLYLVISPTI FILCLSDLHS NNLLAAKRKR MSERVRKMFY HAYDNYMMYA FPHDELKPLT KTFTDSLSEL GNLKLEHLPQ QYNGSALTLI
101: ESLSSLVILG NYTEFEKAII WLSENLSFDV DARVNLFECN IRVLGGLVSA HILATDSTNR LVQLIYKNQL LDLAEDLGRR FLPAFKTPTG LPYAWINLKH
201: GVIVDETTET STSGCGSLIL EMGALSRLTG DTRFETAALR ALRKLWSMRS SLNLLGTTLD VATGDWIEYS SGIGAGMFLL VENI

Best Arabidopsis Sequence Match ( AT1G27520.1 )
(BLAST)

001: MSCPIHPRRL FLCLLISLTF FVVDPSSQHI EVKKKQMREK VREMFYHAYD NYMTYAFPHD ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS
101: SLAILGNSTE FEKGVLWLSE NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPNNRLIQG SYNNQLLRLA EDLGKRFLPA FETPTGLPYA WINLKNGVME
201: NETTETSTSG CGSLVLEMGA LSRLTGDPRF ESAALRALRQ LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFHSAY
301: LASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT
401: KDPWYLDVGE SMVKSLNLYT KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS SWHEKLPETY FSGNWTLSKS
501: GAWESRASAL SLQVCPLISL NSRHPEQQRE SACHVLDEQI NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL

Arabidopsis Description

MNS5Alpha-mannosidase I MNS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXC9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.