Factsheet for GSMUA_Achr10P01960_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, extracellular

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 3
golgi 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062874	Potato	cytosol	72.9	26.53
VIT_17s0000g07760.t01	Wine grape	extracellular, golgi	75.7	14.14
Solyc03g113900.2.1	Tomato	golgi	72.9	13.49
HORVU6Hr1G076440.3	Barley	extracellular, plastid	69.16	13.38
KRH03356	Soybean	endoplasmic reticulum, golgi	71.03	13.29
AT1G27520.1	Thale cress	golgi	71.03	13.24
Os02t0741300-01	Rice	mitochondrion	71.03	12.99
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	69.16	12.96
Bra032833.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	68.22	12.78
EES05547	Sorghum	endoplasmic reticulum, golgi	69.16	12.78
Zm00001d017997_P010	Maize	golgi	69.16	12.63
TraesCS6B01G339600.1	Wheat	endoplasmic reticulum	68.22	12.59
TraesCS6D01G289200.1	Wheat	endoplasmic reticulum	68.22	12.59
TraesCS6A01G309800.1	Wheat	endoplasmic reticulum, golgi	68.22	12.56
CDX84922	Canola	cytosol	69.16	11.38
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	43.93	6.81
GSMUA_Achr4P12680_001	Banana	golgi	25.23	5.86
GSMUA_Achr10P...	Banana	golgi	26.17	4.64
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	23.36	4.3
GSMUA_Achr6P14460_001	Banana	cytosol	27.1	3.97
PGSC0003DMT400062870	Potato	golgi, plasma membrane	2.8	1.06
KRH57025	Soybean	extracellular	0.93	0.49
GSMUA_Achr4P12690_001	Banana	mitochondrion	0.0	0.0
GSMUA_Achr10P...	Banana	cytosol	0.0	0.0

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:35.1	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0016020
GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr10G01960_001	EnsemblPlants:GSMUA_Achr10P01960_001	EnsemblPlants:GSMUA_Achr10T01960_001	InterPro:Glyco_hydro_47	InterPro:IPR012341
UniProt:M0REM3	PFAM:PF01532	PANTHER:PTHR11742	PANTHER:PTHR11742:SF44	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases
UniParc:UPI000295A82D	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G01960_001]

Coordinates

chr10:-:4690916..4694643

Molecular Weight (calculated)

12517.0 Da

IEP (calculated)

7.499

GRAVY (calculated)

-0.042

Length

107 amino acids

Sequence
(BLAST)

001: MRTGKATYWQ LTSLQAFWPG LQILVGDIAA ANSSHREFFY VWDKFGVLPE RYLLDHGMLH PTEKYYPLRP ELAESTFYLY QATRGYTCFT LFLSSELNNF
101: GCLLFIK

Best Arabidopsis Sequence Match ( AT1G27520.1 )
(BLAST)

001: MSCPIHPRRL FLCLLISLTF FVVDPSSQHI EVKKKQMREK VREMFYHAYD NYMTYAFPHD ELKPLTKSFT DSLSELGNLK LEHLPTDYNG SAVTLVESLS
101: SLAILGNSTE FEKGVLWLSE NLTFDIDARV NLFECNIRVL GGLISAHLLA IDPNNRLIQG SYNNQLLRLA EDLGKRFLPA FETPTGLPYA WINLKNGVME
201: NETTETSTSG CGSLVLEMGA LSRLTGDPRF ESAALRALRQ LWRMRSSLDL LGTTLDVVTG EWIEYSSSIG AGVDSFYEYL LKAYILFGKE DYWRMFHSAY
301: LASQKYFRHG PWYHEANMWS GKPTYWQLTS LQAFWPGLQV LVGDIAAANS SHREFFHVWE KFGVLPERYL LDHQIIHPTM KYYPLRPELA ESTFYLYQAT
401: KDPWYLDVGE SMVKSLNLYT KVPGGFASVR DVTTMQLEDH QHSFFLAETC KYLYLLFDDS FVAKRNYIFT TEGHPIQVVS SWHEKLPETY FSGNWTLSKS
501: GAWESRASAL SLQVCPLISL NSRHPEQQRE SACHVLDEQI NHKCWSNKEC GVDATTCRLR TCSGVGYCGL WNPL

Arabidopsis Description

MNS5Alpha-mannosidase I MNS5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXC9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.