Factsheet for GSMUA_Achr4P21040_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
nucleus 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol, extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68502	Canola	extracellular, golgi	37.54	73.16
KXG33484	Sorghum	golgi	63.33	66.21
Zm00001d012643_P007	Maize	golgi	62.32	66.05
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	58.26	65.05
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	57.97	64.62
Os01t0773600-01	Rice	mitochondrion	62.32	62.87
AT5G43710.1	Thale cress	endoplasmic reticulum	56.67	62.66
TraesCS3A01G322000.1	Wheat	golgi	60.72	62.63
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	60.43	62.33
TraesCS3B01G344300.2	Wheat	golgi, mitochondrion	61.01	62.19
CDX96894	Canola	extracellular, golgi	55.07	61.69
HORVU3Hr1G075850.2	Barley	plastid	61.59	61.06
VIT_05s0020g04650.t01	Wine grape	endoplasmic reticulum	60.29	61.0
Bra035984.1-P	Field mustard	extracellular, golgi	51.01	60.27
PGSC0003DMT400041971	Potato	extracellular, golgi	26.23	57.83
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	6.81	43.93
GSMUA_Achr10P...	Banana	cytosol	17.68	42.81
GSMUA_Achr4P12680_001	Banana	golgi	17.54	26.25
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	21.16	25.13
GSMUA_Achr10P...	Banana	golgi	20.87	23.88
GSMUA_Achr6P14460_001	Banana	cytosol	21.45	20.25
GSMUA_Achr4P12690_001	Banana	mitochondrion	4.78	19.3

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004559	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798
GO:GO:0019538	GO:GO:0030433	EnsemblPlantsGene:GSMUA_Achr4G21040_001	EnsemblPlants:GSMUA_Achr4P21040_001	EnsemblPlants:GSMUA_Achr4T21040_001	InterPro:Glyco_hydro_47
InterPro:IPR012341	UniProt:M0SQR7	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF41
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM	UniParc:UPI000294A123	:	:

Description

Probable alpha-mannosidase I MNS4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G21040_001]

Coordinates

chr4:-:21564249..21581001

Molecular Weight (calculated)

77355.6 Da

IEP (calculated)

5.685

GRAVY (calculated)

-0.120

Length

690 amino acids

Sequence
(BLAST)

001: MRWKSLFLWV LQLMVFSAIF PPGVSADGVT PAEAKELRDE VRDMFYHAFD GYIKHAFPLD ELRPLTCKGE DSLGGYALTL IDSLDTLALL GDRERFNAAV
101: DWVSENVRFD IDKTVSVFET TIRILGGLLS AHLIASDYAT GMKIQSYDDQ LLHLSVDLAQ RLLPAFDTPT GIPFGSVNLL HGIRQLVLGS YIITSTAGGG
201: TLTLEFGVLS RLTNNAVFEQ VTKNAVRGIW ARRSKINLVG AHINIFTGEW TQKAISLTFS ISINRTSIDS FYEYLLKAYL LFGDEEYLFM FQEAYKAAMR
301: YLHHDPWYVE VNMNSAATVW PLFNSLQAFW PGLQVLAGDV DPAIRTHAAF FSVWKKYGFT PEGFNLATMS VQHGQKSYPL RPELIESTYW LFKATRDPRY
401: LDVGRDIVAS LQYGARCPCG YCHIADVESH EQDDHMESFF LAETVKYLWL LFDLSVGPDN IVENGPYKYI FSTEGHFLPA TPEISLVNEH CSYFGAFCKD
501: GANNRYGIFE TSFNHHKTND THSHGFFSSS VAQPKIQDSF SASGFVKGHC QGLTHGQKFG ISYSEDEENT YSSDASQPQR HDVVVVTNPS LKPVGSDDGS
601: NNTQELSKDL KVVHLSDNKD DNDSNQGTHP IHLDVKDIRL LLSLPLDIKG SLSHYTGAYG MHRIMLISSF VVCLYTMKIQ GVYEVDSTVV

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.