Factsheet for GSMUA_Achr6P14460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
golgi 1
endoplasmic reticulum 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	golgi	66.76	80.93
VIT_10s0003g03280.t01	Wine grape	cytosol	62.52	71.52
Bra010804.1-P	Field mustard	golgi	57.73	69.64
CDX90221	Canola	golgi	57.46	69.31
TraesCS1D01G127200.2	Wheat	plastid	60.74	69.05
Zm00001d010454_P001	Maize	plasma membrane	60.6	69.0
KRH21064	Soybean	endoplasmic reticulum	59.78	68.93
HORVU1Hr1G029490.1	Barley	plastid	60.6	68.9
EES19212	Sorghum	plastid	60.47	68.85
KRH11192	Soybean	endoplasmic reticulum	59.37	68.56
Solyc02g070520.2.1	Tomato	nucleus	58.96	68.52
TraesCS1B01G145500.1	Wheat	plastid	60.19	68.43
Os05t0209100-01	Rice	cytosol, golgi, plastid	60.33	68.37
CDY35266	Canola	golgi	56.91	68.2
TraesCS1A01G126300.2	Wheat	plastid	60.88	68.15
CDY26300	Canola	golgi	57.05	67.59
Bra032351.1-P	Field mustard	golgi	57.05	67.59
CDX99872	Canola	golgi, plastid	56.77	67.26
AT1G30000.2	Thale cress	extracellular, golgi, plasma membrane	54.99	62.42
GSMUA_Achr4P12680_001	Banana	golgi	23.8	37.74
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	27.91	35.11
GSMUA_Achr10P...	Banana	cytosol	10.81	27.72
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	3.97	27.1
GSMUA_Achr4P12690_001	Banana	mitochondrion	5.34	22.81
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	20.25	21.45

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.10.287.370	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	MapMan:20.3.2.6
InterPro:6hp_glycosidase-like_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488
GO:GO:0005509	GO:GO:0005515	GO:GO:0005575	GO:GO:0006457	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016272	GO:GO:0016787	GO:GO:0016798
GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr6G14460_001	EnsemblPlants:GSMUA_Achr6P14460_001	EnsemblPlants:GSMUA_Achr6T14460_001	InterPro:Glyco_hydro_47	InterPro:IPR009053
InterPro:IPR012341	UniProt:M0T6Z4	PFAM:PF01532	PFAM:PF01920	InterPro:PFD_beta-like	PRINTS:PR00747
PANTHER:PTHR11742	PANTHER:PTHR11742:SF55	InterPro:Prefoldin	SUPFAM:SSF46579	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases
TMHMM:TMhelix	UniParc:UPI000294A783	SEG:seg	:	:	:

Description

Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G14460_001]

Coordinates

chr6:-:9571662..9581208

Molecular Weight (calculated)

82403.9 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.367

Length

731 amino acids

Sequence
(BLAST)

001: MSSRSLPYSV QDVHYDNAKF RHRSPFKVIT QALVTSRIRY SCGGCSIGKF LMLLMIVGLT YLVMHRSPDH SASNVLSNGV ENGEHKYVKE GVSRIRRIWR
101: KPPRLPPQLP PDEEGNFRSS PEEQRLYWVS RQQKVKEAFI HAWSGYRDYA MGYDELMPLS RRGTDGLGGL GATIIDSLDT AIIMGADEIV IEAMSWIENK
201: LMERIEKKGQ VNLFETTIRV LGGLLSAYHL SGGDNVTTGD IGIPMTLKGV KSDILLEIAK NLGDRLLSAF TSSPTPIPFS DVVLHDRSAH PAPDGLSSTS
301: EVSTLQLEFN YLSKVSGDPK YGSEAMKVLE HFRTLPKVEG LVPIYISPHS GQFNGENIRL GSRGDSYYEY LIKVWIQQKN SGSHLNYLYE MYEEAMRGVR
401: HLLVRRSIPK GLVFVGELPY GSNGAFSPKM DHLVCFLPGT LALGATKGIT RKKAVERNLL TPEDLENLKL AEDLAKTCFE MYAVTSTGLA PEIAYFHVEG
501: DSEGGLDGGN KSSEYIDDIL IKHNDRHNLL RPETVESLFV LHRITEDPKY REWGWQIFEA FEKYTKADSG GYTSLDDVTV IPPRKRDKME TFFLGETLKY
601: LYLLFGDEHV VPLDKFVFNT EAHPLPINIA KNHQVRKQYT IQLGENELVL KELELLNENS NVYKLIGPVL VKQDLAEANA NVRKRIEYIS AELKRLDGTL
701: QDLEDKQNSK KESVLKLQQR IHSLQAGKSK S

Best Arabidopsis Sequence Match ( AT1G30000.1 )
(BLAST)

001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT

Arabidopsis Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.