Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G127200.2 | Wheat | plastid | 98.76 | 98.76 |
| HORVU1Hr1G029490.1 | Barley | plastid | 97.67 | 97.67 |
| TraesCS1A01G126300.2 | Wheat | plastid | 98.13 | 96.63 |
| Os05t0209100-01 | Rice | cytosol, golgi, plastid | 86.16 | 85.89 |
| Zm00001d010454_P001 | Maize | plasma membrane | 83.2 | 83.33 |
| EES19212 | Sorghum | plastid | 83.05 | 83.18 |
| GSMUA_Achr10P... | Banana | golgi | 66.41 | 70.81 |
| Solyc02g070520.2.1 | Tomato | nucleus | 64.85 | 66.3 |
| VIT_10s0003g03280.t01 | Wine grape | cytosol | 65.79 | 66.2 |
| Bra010804.1-P | Field mustard | golgi | 61.59 | 65.35 |
| CDX90221 | Canola | golgi | 61.43 | 65.18 |
| KRH21064 | Soybean | endoplasmic reticulum | 63.92 | 64.83 |
| KRH11192 | Soybean | endoplasmic reticulum | 63.76 | 64.77 |
| CDY35266 | Canola | golgi | 61.43 | 64.75 |
| CDY26300 | Canola | golgi | 61.74 | 64.34 |
| Bra032351.1-P | Field mustard | golgi | 61.74 | 64.34 |
| CDX99872 | Canola | golgi, plastid | 61.28 | 63.86 |
| GSMUA_Achr6P14460_001 | Banana | cytosol | 68.43 | 60.19 |
| AT1G30000.2 | Thale cress | extracellular, golgi, plasma membrane | 59.88 | 59.78 |
| TraesCS2B01G453500.2 | Wheat | golgi, mitochondrion, plastid | 33.28 | 35.73 |
| TraesCS6B01G339600.1 | Wheat | endoplasmic reticulum | 21.0 | 23.28 |
| TraesCS3B01G344300.2 | Wheat | golgi, mitochondrion | 22.08 | 20.97 |
Protein Annotations
| KEGG:00510+3.2.1.113 | KEGG:00513+3.2.1.113 | Gene3D:1.50.10.10 | MapMan:19.1.1.1.3 | InterPro:6hp_glycosidase-like_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004571 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016787 | InterPro:Glyco_hydro_47 | InterPro:IPR012341 | PFAM:PF01532 | PRINTS:PR00747 | PANTHER:PTHR11742 |
| PANTHER:PTHR11742:SF55 | SUPFAM:SSF48225 | InterPro:Seven-hairpin_glycosidases | EnsemblPlantsGene:TraesCS1B01G145500 | EnsemblPlants:TraesCS1B01G145500.1 | SEG:seg |
Description
No Description!
Coordinates
chr1B:+:199570505..199575777
Molecular Weight (calculated)
71607.6 Da
IEP (calculated)
8.175
GRAVY (calculated)
-0.349
Length
643 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGGSAPLPY SMRDVDGGAY NNAKFRQRSR LKMVTQALIS KSSKYQFGKF TLGKFLSLLM VSGLIYLLAH KSSKGFVSGE LHNKEVESRH ASKDSPTIRT
101: FWRKPPRLPP RLPPNEIYKN STILHHPPSS EWTSRQKKVK EAFEHAWSGY RNYALGHDEL MPLSRRGVDG LGGLGATVVD SLDTAIIMGA DDIVSEASKW
201: IEDNLMKKIS EKGQVNLFET TIRVLGGLLS AYHLSGGDQA GGGDSGIAVT PNKTNPDRLL AISKDLADRL LLAFTSSPSA IPFSDVVLRD RSAHASPDGL
301: SSTSEATTLQ LEFSYLSRIS GDPKYDSETM KVLEHMRTLP TVEGLVPIYI NPYSGQFSGE NIRLGSRGDS YYEYLLKVWI QQENYRNTSL KYLFEMYTEA
401: MKGVKHLLVR KTTPNGLVFV GELPSGRNGA FSPKMDHLVC FLPGTLALGA TKGITKKKAL ESNLLTKEDI ENLQLAEDLA KTCVEMYFVT STGLAPEITY
501: FHIEGNPDGG PDGGNKSNEY ISDITIKPLD RHNLLRPETV ESLFVLHRIT EDPKYREWGW QIFQAFEKYT KVDSGGYTSL DDVTSLPPPR RDKMETFFLG
601: ETLKYLYLLF GESNILPLDK YVFNTEAHPL PVIRSVVQVS NTV
101: FWRKPPRLPP RLPPNEIYKN STILHHPPSS EWTSRQKKVK EAFEHAWSGY RNYALGHDEL MPLSRRGVDG LGGLGATVVD SLDTAIIMGA DDIVSEASKW
201: IEDNLMKKIS EKGQVNLFET TIRVLGGLLS AYHLSGGDQA GGGDSGIAVT PNKTNPDRLL AISKDLADRL LLAFTSSPSA IPFSDVVLRD RSAHASPDGL
301: SSTSEATTLQ LEFSYLSRIS GDPKYDSETM KVLEHMRTLP TVEGLVPIYI NPYSGQFSGE NIRLGSRGDS YYEYLLKVWI QQENYRNTSL KYLFEMYTEA
401: MKGVKHLLVR KTTPNGLVFV GELPSGRNGA FSPKMDHLVC FLPGTLALGA TKGITKKKAL ESNLLTKEDI ENLQLAEDLA KTCVEMYFVT STGLAPEITY
501: FHIEGNPDGG PDGGNKSNEY ISDITIKPLD RHNLLRPETV ESLFVLHRIT EDPKYREWGW QIFQAFEKYT KVDSGGYTSL DDVTSLPPPR RDKMETFFLG
601: ETLKYLYLLF GESNILPLDK YVFNTEAHPL PVIRSVVQVS NTV
001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT
Arabidopsis Description
MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.