Factsheet for Zm00001d010454_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19212	Sorghum	plastid	96.88	96.88
Os05t0209100-01	Rice	cytosol, golgi, plastid	85.83	85.43
TraesCS1D01G127200.2	Wheat	plastid	83.96	83.83
HORVU1Hr1G029490.1	Barley	plastid	83.8	83.67
TraesCS1B01G145500.1	Wheat	plastid	83.33	83.2
TraesCS1A01G126300.2	Wheat	plastid	83.8	82.39
GSMUA_Achr10P...	Banana	golgi	66.51	70.81
VIT_10s0003g03280.t01	Wine grape	cytosol	67.45	67.76
Solyc02g070520.2.1	Tomato	nucleus	66.2	67.57
Bra010804.1-P	Field mustard	golgi	63.4	67.16
CDX90221	Canola	golgi	63.24	67.0
CDY35266	Canola	golgi	63.24	66.56
KRH11192	Soybean	endoplasmic reticulum	64.64	65.56
CDY26300	Canola	golgi	62.93	65.48
Bra032351.1-P	Field mustard	golgi	62.93	65.48
KRH21064	Soybean	endoplasmic reticulum	64.64	65.46
CDX99872	Canola	golgi, plastid	62.62	65.15
AT1G30000.2	Thale cress	extracellular, golgi, plasma membrane	61.22	61.02
GSMUA_Achr6P14460_001	Banana	cytosol	69.0	60.6
Zm00001d026257_P003	Maize	golgi, mitochondrion	31.93	36.35
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	31.62	35.93
Zm00001d019006_P001	Maize	cytosol	11.68	33.48
Zm00001d025428_P002	Maize	cytosol	5.61	32.14
Zm00001d031739_P001	Maize	cytosol	5.92	31.67
Zm00001d003736_P001	Maize	plastid	16.36	24.59
Zm00001d012643_P007	Maize	golgi	22.9	22.58
Zm00001d017997_P010	Maize	golgi	20.41	22.35

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	InterPro:6hp_glycosidase-like_sf	ProteinID:AQK94075.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_47
InterPro:IPR012341	UniProt:K7UWA5	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF55
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	UniParc:UPI000220BF4C	EnsemblPlantsGene:Zm00001d010454	EnsemblPlants:Zm00001d010454_P001	EnsemblPlants:Zm00001d010454_T001
SEG:seg	:	:	:	:	:

Description

Mannosyl-oligosaccharide 12-alpha-mannosidase MNS3

Coordinates

chr8:+:115914488..115918396

Molecular Weight (calculated)

71672.6 Da

IEP (calculated)

7.172

GRAVY (calculated)

-0.353

Length

642 amino acids

Sequence
(BLAST)

001: MSGSSGPLPY SMRDVGAGGA YNNAKFRHRS RLKMVLQSLA TNRSKYHCGK FTVGKFLSLL MVSGLLYLFM HKGSEGIVSS ELHGKEVQNK NVRRSPSIRT
101: FWRKPPRLPP RLPPNEIYKN NSLLQQSPSE WTSRQKKVKE AFEHAWSGYQ KYAMGYDELM PLSHRGTDGL GGLGATIVDS LDTAIIMGAD DVVSEASKWI
201: EDNLMKRISE KGQVNLFETT IRVLGGLLSA YHLSGGDHPG AGDSGVPVTY KKANPERLLE VSKDLADRLL LAFTSSPTAI PLSDVILRDH TAHAAPDGLS
301: STSEASTLQL EFSYLSKVLG DPKYDRAAMK VLEHIHTLPK VEGLVPIYIN PSSGQFSGEN IRLGSRGDSY YEYLLKVWVQ QEEYRDSSLK YLFEMYTEAM
401: RGVKHLLVRK TVPNGLVFVG ELPFGRNGGF SPKMDHLVCF LPGTLALGAT KGITKRKALE TNLLTDEDIE NLQLAEDLAK TCVEMYFVTS TGLAPEIAYF
501: HIEGDTEGGP DGGNKSSKYI NDIVIKPLDR HNLLRPETVE SLFVLYRITE DSKYREWGWQ IFQAFEKYTK VDSGGYTSLD DVTSLPPSTR DKMETFFLGE
601: TLKYLYLLFD ENNTLPLDKY VFNTEAHPLP VMRSAEQASH SV

Best Arabidopsis Sequence Match ( AT1G30000.1 )
(BLAST)

001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT

Arabidopsis Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.