Factsheet for GSMUA_Achr10P14310_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
golgi 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g03280.t01	Wine grape	cytosol	72.31	68.23
Bra010804.1-P	Field mustard	golgi	67.99	67.66
CDX90221	Canola	golgi	67.66	67.33
TraesCS1D01G127200.2	Wheat	plastid	71.48	67.03
Solyc02g070520.2.1	Tomato	nucleus	69.65	66.77
GSMUA_Achr6P14460_001	Banana	cytosol	80.93	66.76
KRH21064	Soybean	endoplasmic reticulum	70.15	66.72
HORVU1Hr1G029490.1	Barley	plastid	71.14	66.72
EES19212	Sorghum	plastid	70.98	66.67
KRH11192	Soybean	endoplasmic reticulum	69.98	66.67
Zm00001d010454_P001	Maize	plasma membrane	70.81	66.51
TraesCS1B01G145500.1	Wheat	plastid	70.81	66.41
TraesCS1A01G126300.2	Wheat	plastid	71.81	66.31
CDY26300	Canola	golgi	67.66	66.13
Bra032351.1-P	Field mustard	golgi	67.66	66.13
CDY35266	Canola	golgi	66.83	66.07
Os05t0209100-01	Rice	cytosol, golgi, plastid	70.65	66.05
CDX99872	Canola	golgi, plastid	67.5	65.96
AT1G30000.2	Thale cress	extracellular, golgi, plasma membrane	66.17	61.96
GSMUA_Achr4P12680_001	Banana	golgi	28.36	37.09
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	33.33	34.6
GSMUA_Achr10P...	Banana	cytosol	12.6	26.67
GSMUA_Achr10P...	Banana	extracellular, golgi, mitochondrion, plastid	4.64	26.17
GSMUA_Achr4P12690_001	Banana	mitochondrion	6.63	23.39
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	23.88	20.87

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.3	InterPro:6hp_glycosidase-like_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr10G14310_001	EnsemblPlants:GSMUA_Achr10P14310_001
EnsemblPlants:GSMUA_Achr10T14310_001	InterPro:Glyco_hydro_47	InterPro:IPR012341	UniProt:M0RI57	PFAM:PF01532	PRINTS:PR00747
PANTHER:PTHR11742	PANTHER:PTHR11742:SF55	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix	UniParc:UPI000296D4CE
SEG:seg	:	:	:	:	:

Description

Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G14310_001]

Coordinates

chr10:+:22622318..22628147

Molecular Weight (calculated)

67824.2 Da

IEP (calculated)

6.881

GRAVY (calculated)

-0.298

Length

603 amino acids

Sequence
(BLAST)

001: MQDIHYDNAK FRRRSPLKVI TQALVTSHIR YCCRGCSTGN FLMLLMILGL TYLITHKSSD HSASNIHLNS AANVGHKYVK EGVSIIDKIW RKPPRLPPQL
101: PPDEAQIVSS SLEEQRLHWF SRKQKVKEAF VHAWSGYKNH AMGYDELMPL SQRGTDGLGG LGATIVDSLD TAIIMGADEI VYEAVPWIEK QLVERIEKKG
201: QVNLFETTIR VLGGLLSAYH LSRGDKGTIS DTDRLLSAFA SSPTSIPFSD VVLHDHSAHP APDGLSSTAE VSTLQLEFNY LSEISGDPKY RSKAMKVLEH
301: IRSLPKVEGL VPIHISPHSG QFNGENIRLG SRGDSYYEYL IKVWIQQKNS GNQLNYLYQM YEEAMRGVRH LLVRKSIPKG LVFVGELPHG SNGSFSPKMD
401: HLVCFLPGTL ALGATKGITK KKAIERNLLT PDDLENLKLA EDLAKTCFEM YAITSTGLAP EIAYFHIEGD SEGGLDGGNK SSEYIDDIII KHNDRHNLLR
501: PETVESLFVL HRVTEDPKYR EWGWQIFEAF EKYTKVDSGG YTSLDDVTLI PPPRRDKMET FFLGETLKYL YLLFGDENVV PLDKFVFNTE AHPLPIIWSK
601: YSA

Best Arabidopsis Sequence Match ( AT1G30000.1 )
(BLAST)

001: MSKSLPYSVK DIHYDNAKFR HRSPLKVFSQ SLLTLSTKRN YASCSTGKFL ILILFFGVAC LMLMSKSPNE SGLNEKGKVT FVGGLRLGGL LRKPPRLPPR
101: LSPDEGQLRG SSTNGSTISN SDPKWAARQQ SVKEAFDHAW SGYRKYAMGY DELMPISQKG VDGLGGLGAT VVDALDTAMI MGLDNIVSEA GSWVETHLLE
201: RISQKGQVNL FETTIRVLGG LLSAYHLSGG EQGTVNMTHV GPKPVIYLNI AKDLADRLLS AFTSSPTPVP FCDVILHEST AHPAPGGASS TAEVASVQLE
301: FNYLSSISGD PKYSTEAMKV LAHIKTLPKT EGLVPIYISP QTGDFVGENI RLGSRGDSYY EYLIKVWLQQ GAKLNSNFTY LHDMYIEAMK GVRHLLVQNS
401: IPKGLVFVGE LPYGSKGEFS PKMDHLVCFL PGTLALGATK GLTKEQALKE NLLSFEDLEN LKLAEDLAKT CFEMYEVTAT GLAPEIAYFH TKDYTEDGLD
501: GGNKSSMYAN DIIIKPADRH NLLRPETVES LFVLYRITKD TKYRDQGWQI FEAFEKYTKV KSGGYTSLDD VTEVPPHRRD KMETFFLGET LKYLYLLFGD
601: DSVIPLDKFV FNTEAHPLPI RRNT

Arabidopsis Description

MNS3alpha-mannosidase 3 [Source:TAIR;Acc:AT1G30000]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.