Factsheet for VIT_05s0020g04650.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68502	Canola	extracellular, golgi	41.35	79.66
KRH34374	Soybean	endoplasmic reticulum, golgi, vacuole	64.37	70.92
AT5G43710.1	Thale cress	endoplasmic reticulum	63.93	69.87
Solyc06g053860.2.1	Tomato	endoplasmic reticulum, golgi	62.9	69.42
CDX96894	Canola	extracellular, golgi	59.82	66.23
Bra035984.1-P	Field mustard	extracellular, golgi	55.28	64.55
Zm00001d012643_P007	Maize	golgi	58.8	61.6
KXG33484	Sorghum	golgi	59.38	61.36
PGSC0003DMT400041971	Potato	extracellular, golgi	27.86	60.7
GSMUA_Achr4P21040_001	Banana	extracellular, golgi	61.0	60.29
TraesCS3A01G322000.1	Wheat	golgi	58.5	59.64
TraesCS3D01G309300.1	Wheat	endoplasmic reticulum, golgi, vacuole	58.5	59.64
Os01t0773600-01	Rice	mitochondrion	59.53	59.36
TraesCS3B01G344300.2	Wheat	golgi, mitochondrion	58.65	59.08
HORVU3Hr1G075850.2	Barley	plastid	58.36	57.18
VIT_17s0000g07760.t01	Wine grape	extracellular, golgi	32.26	38.39
VIT_11s0052g00150.t01	Wine grape	extracellular, golgi, vacuole	3.52	24.74
VIT_09s0054g00370.t01	Wine grape	golgi, mitochondrion	20.38	24.17
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	17.74	24.1
VIT_09s0054g00230.t01	Wine grape	cytosol	11.29	22.45
VIT_10s0003g03280.t01	Wine grape	cytosol	20.53	21.91
VIT_09s0054g00310.t01	Wine grape	cytosol	2.35	17.39

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:19.1.1.1.4	InterPro:6hp_glycosidase-like_sf	ProteinID:CCB50492
ProteinID:CCB50492.1	UniProt:F6HDX1	EMBL:FN595749	GO:GO:0003674	GO:GO:0003824	GO:GO:0004571
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006491	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0016798	GO:GO:0019538	InterPro:Glyco_hydro_47	InterPro:IPR012341	PFAM:PF01532
PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF41	SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00021081BF	ArrayExpress:VIT_05s0020g04650	EnsemblPlantsGene:VIT_05s0020g04650	EnsemblPlants:VIT_05s0020g04650.t01	SEG:seg

Description

alpha-1,2-Mannosidase [Source:UniProtKB/TrEMBL;Acc:F6HDX1]

Coordinates

chr5:+:6504231..6527354

Molecular Weight (calculated)

76558.1 Da

IEP (calculated)

4.536

GRAVY (calculated)

-0.211

Length

682 amino acids

Sequence
(BLAST)

001: MEAVKPWILL FSILLLFSHI FILTTLAEGV TPQEAKLLRD EVRGMFYHAF DGYMENAFPL DELRPLTCEG EDTLGGYALT LIDSLDTLAL LGDRERFATS
101: VEWIGKNLRF DINKTVSVFE TTIRILGGLL SGHLIASDYA TGMKIPSYDN QLLHLCEDLA RRLLPAFDTP TGIPFGSVNL LHGVDEHESK AKPLSNEMEI
201: AILSHYWINA YFCFLFVLTP SHIITSTAGG GTLTLEFGVL SRLTNDPIFE QVTKNAVHGL WARRSKLNLV GAHINVFTGE WTQKDAGIGT SIDSFYEYLL
301: KAYLLFGDEE YLFIFQEAYG AAMYYLYNDP WYVEVNMDSA AIVWPLFNSL QAFWPGLQVL AGDIDPAIRT HTAFFSVWKR YGFTPEGFNL ATLSVQHGQK
401: SYPLRPELME STYWLYKATR NPRYLDAGRD MVTSLQYGAR CPCGYCHISD VEFHKQEDHM ESFFLAETVK YLWLLFDLAA GSDNLVENGP YKYIFSTEGH
501: LLPATPQISL IREHCSYFGA YCNNDDSRQD SRTLDLSTDH QENKSQLYRG WDPSSSPSDN TLREPTSISG SMKGLCPGLT HGQKFGISYL ASTDKKTYEG
601: ESTSQKEATV VPTQSAVIVS NPDAESTGQR EVTVVQSHSL VVVSNPEVEF SQPDDKNDHD KDQGLIEEEL ESDPSQDIDE GA

Best Arabidopsis Sequence Match ( AT5G43710.1 )
(BLAST)

001: MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT
101: SSVEWIGKNL QFNINKTVSV FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV NLMYGVDKHE SKITSTAGGG
201: TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW
301: YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF
401: VASLQYGAKC PCGYCHITDV ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA REHCSYFGGY CPSNSTKLEQ
501: EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS
601: SNDQTGQELT LLESETDDQR SYSS

Arabidopsis Description

MNS4Alpha-mannosidase I MNS4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG93]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.