CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 3
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22853	Canola	golgi, mitochondrion, plastid	97.86	97.86
Bra018917.1-P	Field mustard	golgi, mitochondrion, plastid	97.15	97.15
CDY46554	Canola	golgi, mitochondrion	91.09	91.25
CDY52948	Canola	golgi, mitochondrion	89.84	90.32
AT1G51590.1	Thale cress	golgi, mitochondrion	89.84	90.0
KRH58075	Soybean	extracellular	13.73	81.91
CDX82213	Canola	golgi, mitochondrion	78.79	78.79
CDY32409	Canola	golgi, mitochondrion	78.25	78.25
PGSC0003DMT400023755	Potato	cytosol	35.83	76.72
VIT_09s0054g00230.t01	Wine grape	cytosol	46.88	76.68
CDY50074	Canola	golgi, mitochondrion, plastid	77.9	75.87
CDY19581	Canola	golgi, mitochondrion, plastid	76.83	74.44
VIT_09s0054g00370.t01	Wine grape	golgi, mitochondrion	73.97	72.17
Solyc03g123900.2.1	Tomato	extracellular, nucleus	74.15	71.85
VIT_09s0054g00310.t01	Wine grape	cytosol	11.76	71.74
KRH47289	Soybean	endoplasmic reticulum	73.62	71.7
Zm00001d026257_P003	Maize	golgi, mitochondrion	71.66	71.28
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	71.48	70.97
KRH44626	Soybean	mitochondrion	73.08	70.93
EES12812	Sorghum	golgi, mitochondrion, plastid	71.3	70.92
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	71.84	69.36
Os04t0606400-01	Rice	golgi	70.05	68.71
Solyc06g063260.2.1	Tomato	golgi, mitochondrion	69.16	68.67
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	59.71	66.73
KRH19110	Soybean	cytosol	44.38	66.58
GSMUA_Achr4P12680_001	Banana	golgi	54.55	66.38
HORVU2Hr1G100750.2	Barley	golgi, mitochondrion, plastid	69.16	64.77
TraesCS2A01G432100.2	Wheat	golgi, mitochondrion, plastid	68.98	64.61
TraesCS2B01G453500.2	Wheat	golgi, mitochondrion, plastid	68.98	64.61
TraesCS2D01G430000.2	Wheat	golgi	68.98	64.61
KRH02771	Soybean	golgi, plastid	66.84	64.54
Zm00001d019006_P001	Maize	cytosol	25.13	62.95
Zm00001d031739_P001	Maize	cytosol	13.19	61.67
Zm00001d025428_P002	Maize	cytosol	12.12	60.71
Zm00001d003736_P001	Maize	plastid	34.4	45.2
CDX90221	Canola	golgi	36.19	33.5
CDY35266	Canola	golgi	36.36	33.44
CDX99872	Canola	golgi, plastid	36.72	33.39
CDY26300	Canola	golgi	36.54	33.23
CDY68502	Canola	extracellular, golgi	18.72	29.66
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	24.06	23.64
CDX96894	Canola	extracellular, golgi	24.6	22.4
CDX84922	Canola	cytosol	24.6	21.23
CDY14886	Canola	golgi	5.7	16.08

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:18.1.1.6.3	InterPro:6hp_glycosidase-like_sf	GO:A0A078IZ23
UniProt:A0A078IZ23	EnsemblPlants:CDY55669	ProteinID:CDY55669	ProteinID:CDY55669.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00017180001	InterPro:Glyco_hydro_47
InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF42	SUPFAM:SSF48225
InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EE83BF	SEG:seg	:

Description

BnaC06g04670Dalpha-1,2-Mannosidase [Source:UniProtKB/TrEMBL;Acc:A0A078IZ23]

Coordinates

chrLK033419:+:40059..44272

Molecular Weight (calculated)

63915.9 Da

IEP (calculated)

5.483

GRAVY (calculated)

-0.408

Length

561 amino acids

Sequence
(BLAST)

001: MARSRSISGS GVWKYLNPAY YLRRPRRLAL LFFLFVSVSM VVWDRMNLAR EHEVEVIKLT EEVFRLEQML EELRGVGDGK TLMTHKDVPE DPVDIERRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM IDSLDTLYIM GLDEQFQKAR AWVATSLDFD KDYDASMFET TIRVVGGLLS TYDLSGDKIF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRS GSAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTITFGAM GDSFYEYLLK VWVQGNKTSE VKLYREMWEK SMKGLLSLIK KSTPSSFTYI QEKNGNSYND KMDELACFAP GMLALGASGY GPDEEKKFLT
401: LAEELAWTCY NFYQSTPTKL AGENYYFSAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRIE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN NDQRKPTITL RQRRFGGEVK V

Best Arabidopsis Sequence Match ( AT1G51590.1 )
(BLAST)

001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV

Arabidopsis Description

MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.