CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46554	Canola	golgi, mitochondrion	98.03	97.68
CDY22853	Canola	golgi, mitochondrion, plastid	90.68	90.2
CDY55669	Canola	golgi, mitochondrion, plastid	90.32	89.84
AT1G51590.1	Thale cress	golgi, mitochondrion	88.35	88.04
Bra014291.1-P	Field mustard	mitochondrion	95.16	80.7
KRH58075	Soybean	extracellular	13.44	79.79
CDY32409	Canola	golgi, mitochondrion	75.99	75.58
CDX82213	Canola	golgi, mitochondrion	75.99	75.58
VIT_09s0054g00230.t01	Wine grape	cytosol	46.24	75.22
CDY19581	Canola	golgi, mitochondrion, plastid	76.52	73.75
PGSC0003DMT400023755	Potato	cytosol	34.59	73.66
CDY50074	Canola	golgi, mitochondrion, plastid	75.99	73.61
VIT_09s0054g00310.t01	Wine grape	cytosol	12.01	72.83
Solyc03g123900.2.1	Tomato	extracellular, nucleus	74.55	71.85
KRH47289	Soybean	endoplasmic reticulum	73.3	71.01
VIT_09s0054g00370.t01	Wine grape	golgi, mitochondrion	72.94	70.78
EES12812	Sorghum	golgi, mitochondrion, plastid	71.33	70.57
KRH44626	Soybean	mitochondrion	72.76	70.24
Zm00001d026257_P003	Maize	golgi, mitochondrion	70.61	69.86
GSMUA_Achr2P04510_001	Banana	golgi, mitochondrion	72.22	69.36
Solyc06g063260.2.1	Tomato	golgi, mitochondrion	70.07	69.2
Zm00001d002388_P003	Maize	golgi, mitochondrion, plastid	70.07	69.2
Os04t0606400-01	Rice	golgi	70.07	68.36
VIT_11s0052g00140.t01	Wine grape	golgi, mitochondrion	60.39	67.13
KRH19110	Soybean	cytosol	43.73	65.24
GSMUA_Achr4P12680_001	Banana	golgi	53.41	64.64
Zm00001d031739_P001	Maize	cytosol	13.62	63.33
KRH02771	Soybean	golgi, plastid	65.77	63.17
HORVU2Hr1G100750.2	Barley	golgi, mitochondrion, plastid	67.56	62.94
TraesCS2A01G432100.2	Wheat	golgi, mitochondrion, plastid	67.38	62.77
TraesCS2B01G453500.2	Wheat	golgi, mitochondrion, plastid	67.38	62.77
TraesCS2D01G430000.2	Wheat	golgi	67.38	62.77
Zm00001d025428_P002	Maize	cytosol	12.54	62.5
Zm00001d019006_P001	Maize	cytosol	24.01	59.82
Zm00001d003736_P001	Maize	plastid	33.15	43.33
CDX90221	Canola	golgi	36.2	33.33
CDY35266	Canola	golgi	36.38	33.28
CDX99872	Canola	golgi, plastid	36.38	32.9
CDY26300	Canola	golgi	36.2	32.74
CDY68502	Canola	extracellular, golgi	19.0	29.94
CDY27620	Canola	endoplasmic reticulum, golgi, vacuole	24.01	23.47
CDX96894	Canola	extracellular, golgi	24.37	22.08
CDX84922	Canola	cytosol	24.37	20.92
CDY14886	Canola	golgi	6.45	18.09

Protein Annotations

KEGG:00510+3.2.1.113	KEGG:00513+3.2.1.113	Gene3D:1.50.10.10	MapMan:18.1.1.6.3	InterPro:6hp_glycosidase-like_sf	GO:A0A078IVC9
UniProt:A0A078IVC9	EnsemblPlants:CDY52948	ProteinID:CDY52948	ProteinID:CDY52948.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004571	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00008208001
InterPro:Glyco_hydro_47	InterPro:IPR012341	PFAM:PF01532	PRINTS:PR00747	PANTHER:PTHR11742	PANTHER:PTHR11742:SF42
SUPFAM:SSF48225	InterPro:Seven-hairpin_glycosidases	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EE9460	SEG:seg

Description

BnaC03g77860Dalpha-1,2-Mannosidase [Source:UniProtKB/TrEMBL;Acc:A0A078IVC9]

Coordinates

chrLK033145:-:24660..27970

Molecular Weight (calculated)

63615.8 Da

IEP (calculated)

6.707

GRAVY (calculated)

-0.410

Length

558 amino acids

Sequence
(BLAST)

001: MARGRSITSS GIWRYLNPAY YLRRPKRLAL LFFVFVSVSM VVWDRMNLAR EHEVEVYKLN EEVLRLEQML EELKGVGNGK TLMTQKDVPQ NPVDIERRQK
101: VKEAMLHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM IDSLDTLYIM GLHEQFQKAR EWVATSLDFD KDYDASMFET TIRVVGGLLS TYDLSGDKLF
201: LDKAKDIADR LLPAWNTPTG IPYNIINLRS GNAHNPSWAA GGASILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNGNP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSE VKLYREMWEK SMKGLLSLIN KSTPSSFTYI REKNGNNFVD KMDELACFAP GMLALGASGY GPDEEKKFLT
401: LAEELAWTCY NFYQSTPTKL AGENYFFNAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRIE SGYVGLKDAS AKDNKMQSFF
501: LAETLKYLYL LFSPPSVISL DEWVFNTEAH PLKIVARNEQ RKPTITLRQR RFGGIIKG

Best Arabidopsis Sequence Match ( AT1G51590.1 )
(BLAST)

001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV

Arabidopsis Description

MNS1Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C512]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.