Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 3
- golgi 3
- extracellular 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 77.53 | 84.88 |
| GSMUA_Achr8P00950_001 | Banana | cytosol, endoplasmic reticulum, golgi | 70.93 | 77.65 |
| GSMUA_Achr8P08790_001 | Banana | endoplasmic reticulum, nucleus, peroxisome | 70.52 | 77.03 |
| KRH58854 | Soybean | endoplasmic reticulum, golgi | 60.41 | 70.43 |
| VIT_05s0029g00420.t01 | Wine grape | endoplasmic reticulum | 64.74 | 69.62 |
| Solyc09g092330.1.1 | Tomato | nucleus | 62.89 | 67.48 |
| PGSC0003DMT400053071 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 62.27 | 67.41 |
| KRH31569 | Soybean | mitochondrion | 63.09 | 66.23 |
| CDX77481 | Canola | endoplasmic reticulum | 61.65 | 66.0 |
| CDY64583 | Canola | endoplasmic reticulum | 62.47 | 65.87 |
| Bra014987.1-P | Field mustard | endoplasmic reticulum | 61.65 | 65.86 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 62.27 | 65.65 |
| Bra028348.1-P | Field mustard | endoplasmic reticulum, golgi, nucleus | 62.27 | 65.65 |
| CDX92990 | Canola | endoplasmic reticulum | 61.65 | 65.57 |
| CDX85133 | Canola | endoplasmic reticulum | 61.65 | 65.57 |
| CDY53207 | Canola | endoplasmic reticulum | 61.44 | 65.49 |
| AT3G23820.1 | Thale cress | endoplasmic reticulum | 62.06 | 65.43 |
| Bra001923.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi | 61.44 | 65.35 |
| Zm00001d049804_P001 | Maize | plasma membrane | 60.21 | 65.18 |
| KRG97348 | Soybean | endoplasmic reticulum | 58.97 | 65.15 |
| PGSC0003DMT400040718 | Potato | cytosol, endoplasmic reticulum, golgi | 58.14 | 64.98 |
| PGSC0003DMT400011867 | Potato | cytosol, endoplasmic reticulum, golgi | 60.41 | 64.54 |
| Solyc05g053790.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 56.91 | 63.74 |
| Os08t0526100-01 | Rice | plastid | 62.47 | 63.39 |
| Zm00001d031577_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome, plastid | 58.56 | 63.11 |
| EES14210 | Sorghum | cytosol, extracellular, golgi, plastid | 62.27 | 63.05 |
| GSMUA_Achr5P25290_001 | Banana | mitochondrion | 15.05 | 62.93 |
| Zm00001d021026_P001 | Maize | endoplasmic reticulum | 62.06 | 61.81 |
| EER99141 | Sorghum | cytosol, endoplasmic reticulum, golgi, plastid | 62.89 | 61.74 |
| TraesCS5B01G280700.1 | Wheat | endoplasmic reticulum | 60.62 | 61.51 |
| TraesCS7B01G153900.1 | Wheat | plastid | 62.06 | 61.18 |
| TraesCS5A01G281600.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 60.62 | 61.0 |
| TraesCS5D01G288700.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 60.41 | 60.91 |
| TraesCS7A01G256600.1 | Wheat | plastid | 61.44 | 60.82 |
| TraesCS7D01G257800.1 | Wheat | plastid | 61.44 | 60.82 |
| GSMUA_Achr4P02040_001 | Banana | endoplasmic reticulum | 50.52 | 60.64 |
| GSMUA_Achr4P17900_001 | Banana | endoplasmic reticulum, mitochondrion, peroxisome | 53.61 | 60.47 |
| Os09t0504000-01 | Rice | cytosol, endoplasmic reticulum, golgi | 61.65 | 60.04 |
| GSMUA_Achr10P... | Banana | cytosol, endoplasmic reticulum, golgi | 50.1 | 60.0 |
| GSMUA_Achr3P04850_001 | Banana | endoplasmic reticulum | 51.13 | 59.9 |
| GSMUA_Achr9P13500_001 | Banana | cytosol, endoplasmic reticulum, golgi, plastid | 51.13 | 59.76 |
| HORVU7Hr1G053260.2 | Barley | plastid | 59.59 | 58.98 |
| KRH42756 | Soybean | extracellular, golgi, plastid | 59.79 | 58.82 |
| HORVU5Hr1G075660.1 | Barley | plastid | 60.62 | 57.87 |
| GSMUA_Achr5P18760_001 | Banana | endoplasmic reticulum, golgi, mitochondrion | 53.81 | 56.86 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi, nucleus | 39.18 | 49.35 |
| GSMUA_Achr7P16250_001 | Banana | cytosol, endoplasmic reticulum, golgi | 51.55 | 48.92 |
| GSMUA_Achr5P04690_001 | Banana | endoplasmic reticulum, golgi, nucleus | 25.57 | 26.84 |
| GSMUA_Achr5P13620_001 | Banana | cytosol | 17.53 | 24.22 |
| GSMUA_Achr4P02670_001 | Banana | golgi | 17.32 | 24.07 |
| GSMUA_Achr9P00170_001 | Banana | extracellular, golgi | 17.11 | 23.78 |
| GSMUA_Achr6P22620_001 | Banana | golgi, mitochondrion | 17.11 | 23.78 |
| GSMUA_Achr1P18740_001 | Banana | cytosol | 17.11 | 23.45 |
| GSMUA_Achr5P09200_001 | Banana | golgi | 17.11 | 23.38 |
| GSMUA_Achr11P... | Banana | cytosol, golgi | 16.91 | 20.97 |
| GSMUA_Achr11P... | Banana | mitochondrion | 17.53 | 20.38 |
| GSMUA_Achr8P33320_001 | Banana | mitochondrion | 17.53 | 20.38 |
| GSMUA_Achr3P23390_001 | Banana | mitochondrion | 17.32 | 20.14 |
| GSMUA_Achr4P31860_001 | Banana | mitochondrion | 16.7 | 19.47 |
| GSMUA_Achr8P27530_001 | Banana | cytosol, golgi, plastid | 16.91 | 19.34 |
| GSMUA_Achr3P16370_001 | Banana | golgi, mitochondrion, plastid | 16.7 | 18.71 |
| GSMUA_Achr9P06140_001 | Banana | plastid | 18.56 | 17.27 |
| GSMUA_Achr6P26620_001 | Banana | plastid | 18.35 | 16.57 |
| GSMUA_Achr4P10430_001 | Banana | cytosol, extracellular, mitochondrion | 17.94 | 13.41 |
| GSMUA_Achr3P31810_001 | Banana | cytosol, mitochondrion, peroxisome | 15.46 | 12.08 |
| GSMUA_Achr3P31820_001 | Banana | cytosol, mitochondrion, plastid | 14.85 | 11.9 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 15.26 | 11.64 |
| GSMUA_Achr4P29070_001 | Banana | cytosol | 1.03 | 7.58 |
| GSMUA_Achr4P02550_001 | Banana | mitochondrion | 6.8 | 7.24 |
| GSMUA_Achr4P29060_001 | Banana | cytosol | 2.06 | 4.57 |
| GSMUA_Achr5P10430_001 | Banana | cytosol | 2.47 | 3.92 |
| GSMUA_Achr1P03840_001 | Banana | cytosol | 2.06 | 3.27 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | InterPro:Epimerase_deHydtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016857 | GO:GO:0050662 | EnsemblPlantsGene:GSMUA_Achr7G02740_001 | EnsemblPlants:GSMUA_Achr7P02740_001 | EnsemblPlants:GSMUA_Achr7T02740_001 | UniProt:M0TE64 |
| InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim | PFAM:PF01370 | PFAM:PF16363 | PRINTS:PR01713 |
| PANTHER:PTHR43574 | PANTHER:PTHR43574:SF10 | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI0002959688 | SEG:seg |
Description
UDP-glucuronate 4-epimerase 6 [Source:GMGC_GENE;Acc:GSMUA_Achr7G02740_001]
Coordinates
chr7:+:2214927..2216621
Molecular Weight (calculated)
53540.2 Da
IEP (calculated)
10.137
GRAVY (calculated)
-0.122
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPPDTSKT AKLERCNNYL RRVNSAKIIS ASSRLLFRAS ILATVALILL FTLHYPPLLL LSHYSANAAA RSSHRSLLSS DVTYGGAAWE REVRSSATPR
101: RPSGLTVLVT GAAGFVGTHC SLALKKRGDG VVGLDNFNSY YDPSLKRARQ SLLSRHGVLV VDGDINDTPL LTKLLDVVPF SHVLHLAAQA GVRYAMRNPQ
201: SYPAIVWASS SSVYGLNTAT PFSELHRTDR PASLYAATKK AGEAIAHTYN HIYGLSITGL RFFTVYGPWG RPDMAYFSFT NNILRGKPIT LFRVQDGTAV
301: QRDFTYIDDV VKGCLGALDT AERSTGSGGK KRGPAQLRVY NLGNTSPVPV AKMVGILEEL LGKKAKKHVV TLPQNGDVPY THANVSMAER DLGYRATTDL
401: ATGLKKFVRW YVEYYDRKSK KEARNQKDDV MSWSIYLSLS SSLTKFVHHS FLFFWLTSQS ISWDVNPYNL FANELYIHVV CIGGI
101: RPSGLTVLVT GAAGFVGTHC SLALKKRGDG VVGLDNFNSY YDPSLKRARQ SLLSRHGVLV VDGDINDTPL LTKLLDVVPF SHVLHLAAQA GVRYAMRNPQ
201: SYPAIVWASS SSVYGLNTAT PFSELHRTDR PASLYAATKK AGEAIAHTYN HIYGLSITGL RFFTVYGPWG RPDMAYFSFT NNILRGKPIT LFRVQDGTAV
301: QRDFTYIDDV VKGCLGALDT AERSTGSGGK KRGPAQLRVY NLGNTSPVPV AKMVGILEEL LGKKAKKHVV TLPQNGDVPY THANVSMAER DLGYRATTDL
401: ATGLKKFVRW YVEYYDRKSK KEARNQKDDV MSWSIYLSLS SSLTKFVHHS FLFFWLTSQS ISWDVNPYNL FANELYIHVV CIGGI
001: MPLSATADTS KTVKLERYNS YLRKIHSTKV LNASSKVLFR ATLLVALVLV LIFAINYPPL SDSRAAAAHH LHRRSFLSTG LFSSSSSSSS IGGAAWEKRV
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA
Arabidopsis Description
GAE6UDP-glucuronate 4-epimerase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIS3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.