Factsheet for GSMUA_Achr11P09850_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, nucleus

Predictor Summary:

plastid 1
cytosol 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P13500_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	70.91	65.78
GSMUA_Achr3P04850_001	Banana	endoplasmic reticulum	70.39	65.46
GSMUA_Achr4P02040_001	Banana	endoplasmic reticulum	68.57	65.35
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, golgi	66.49	63.21
KRH02967	Soybean	nucleus	66.23	59.16
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	65.97	58.93
EES05940	Sorghum	endoplasmic reticulum, golgi, plastid	67.01	58.77
Os02t0791500-01	Rice	endoplasmic reticulum, golgi, plastid	66.49	58.58
AT4G30440.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	65.19	58.51
TraesCS6A01G353200.1	Wheat	plastid	66.49	58.45
TraesCS6B01G385900.1	Wheat	plastid	66.49	58.45
TraesCS6D01G335600.1	Wheat	plastid	66.49	58.45
TraesCS7D01G154100.1	Wheat	golgi	65.71	58.43
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	64.94	58.28
CDY70926	Canola	cytosol, endoplasmic reticulum, golgi, plastid	64.94	58.28
CDY28188	Canola	cytosol, endoplasmic reticulum, golgi, plastid	64.94	58.28
CDX72242	Canola	cytosol, endoplasmic reticulum, golgi, plastid	64.42	57.67
CDY39205	Canola	cytosol, endoplasmic reticulum, golgi, plastid	64.16	57.44
Zm00001d018350_P001	Maize	plasma membrane	65.45	57.4
HORVU7Hr1G031270.1	Barley	endoplasmic reticulum	65.97	57.34
OQU75981	Sorghum	endoplasmic reticulum	65.45	57.27
TraesCS7B01G056200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	65.71	57.11
TraesCS7A01G152300.1	Wheat	endoplasmic reticulum	65.71	57.11
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	63.64	56.98
Zm00001d037087_P001	Maize	endoplasmic reticulum	64.94	56.82
Zm00001d045078_P001	Maize	extracellular, golgi	60.78	56.66
PGSC0003DMT400029181	Potato	cytosol, golgi, peroxisome	61.3	55.53
Solyc07g006220.1.1	Tomato	nucleus	61.3	55.53
PGSC0003DMT400020223	Potato	endoplasmic reticulum	61.04	54.52
Solyc12g010540.1.1	Tomato	endoplasmic reticulum	60.52	53.94
Os06t0187200-01	Rice	golgi, peroxisome	41.56	51.78
GSMUA_Achr7P16250_001	Banana	cytosol, endoplasmic reticulum, golgi	67.27	50.68
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	53.51	47.91
GSMUA_Achr8P00950_001	Banana	cytosol, endoplasmic reticulum, golgi	50.65	44.02
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	51.69	43.36
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	49.87	43.34
GSMUA_Achr8P08790_001	Banana	endoplasmic reticulum, nucleus, peroxisome	48.83	42.34
GSMUA_Achr7P02740_001	Banana	endoplasmic reticulum	49.35	39.18
GSMUA_Achr5P04690_001	Banana	endoplasmic reticulum, golgi, nucleus	44.16	36.8
GSMUA_Achr5P25290_001	Banana	mitochondrion	9.09	30.17
GSMUA_Achr1P18740_001	Banana	cytosol	18.44	20.06
GSMUA_Achr5P13620_001	Banana	cytosol	18.18	19.94
GSMUA_Achr4P02670_001	Banana	golgi	17.66	19.48
GSMUA_Achr5P09200_001	Banana	golgi	16.88	18.31
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	16.36	18.05
GSMUA_Achr11P...	Banana	cytosol, golgi	17.92	17.65
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	15.84	17.48
GSMUA_Achr8P33320_001	Banana	mitochondrion	18.18	16.79
GSMUA_Achr11P...	Banana	mitochondrion	18.18	16.79
GSMUA_Achr3P23390_001	Banana	mitochondrion	17.14	15.83
GSMUA_Achr4P31860_001	Banana	mitochondrion	15.84	14.66
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	15.84	14.39
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	15.58	13.86
GSMUA_Achr9P06140_001	Banana	plastid	16.88	12.48
GSMUA_Achr6P26620_001	Banana	plastid	16.62	11.92
GSMUA_Achr4P10430_001	Banana	cytosol, extracellular, mitochondrion	15.84	9.4
GSMUA_Achr3P31810_001	Banana	cytosol, mitochondrion, peroxisome	12.99	8.05
GSMUA_Achr3P31820_001	Banana	cytosol, mitochondrion, plastid	12.47	7.93
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	12.73	7.7
GSMUA_Achr4P29070_001	Banana	cytosol	1.04	6.06
GSMUA_Achr5P10430_001	Banana	cytosol	3.9	4.9
GSMUA_Achr4P02550_001	Banana	mitochondrion	5.19	4.39
GSMUA_Achr1P03840_001	Banana	cytosol	3.38	4.25
GSMUA_Achr4P29060_001	Banana	cytosol	2.34	4.11

Protein Annotations

EnsemblPlants:GSMUA_Achr11P09850_001	EnsemblPlants:GSMUA_Achr11T09850_001	EnsemblPlantsGene:GSMUA_Achr11G09850_001	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43574	PANTHER:PTHR43574:SF17	PFAM:PF16363
SEG:seg	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI00029577DA	UniProt:M0RQW5	MapMan:3.13.4.1

Description

UDP-glucuronate 4-epimerase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G09850_001]

Coordinates

chr11:-:7685072..7686392

Molecular Weight (calculated)

41631.8 Da

IEP (calculated)

10.596

GRAVY (calculated)

-0.218

Length

385 amino acids

Sequence
(BLAST)

001: MEDELLPSTP GKGKIERSHT INRQFHRCFA STGNMFLWAL FLIALIACYL SFESFAGISS RYFRASWGGM RLEKQIRASA TPRRPGAISV LVTGAAGFVG
101: THVSLALRKR GDGVVGLDNF NSYYDPSLKK ARKALLASHG VLVVEGDIND ARLLARLFDV VPFTHVMHLA AQAGVRYAIE KTSSYPAVVR PARRSPTPTI
201: TSTASPSRGS ASSPSTGHGD APTWPTSPSP ATSSRKPITV YRGKNHIDLA RDFTYIDDVV KGCVASPDTA QKSTGSGGQK RGPAQYHIYN LGNTSPVTVP
301: TLVRILERHL KVKAMRNVVE MPANGDVPFT HANIRTALAE LGYSPATNLE TGLKRFVKWY LSYYGYNPAR GTLASSAATK ASKSS

Best Arabidopsis Sequence Match ( AT1G02000.1 )
(BLAST)

001: MSHLDDIPST PGKFKMMDKS PFFLHRTRWQ SSVAKLAFWS LVFFGLLFIF FYRSPISNPD SSRRSLRTYS WGGPAWEKRV RSSARVRTRN GVSVLVTGAA
101: GFVGTHVSAA LKRRGDGVLG LDNFNDYYDT SLKRSRQALL ERSGVFIVEG DINDLSLLKK LFEVVPFTHV MHLAAQAGVR YAMENPGSYV HSNIAGFVNL
201: LEVCKSANPQ PAIVWASSSS VYGLNTKVPF SEKDRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP DMAYFFFTRD ILKGKAISIF
301: EGANHGTVAR DFTYIDDIVK GCLGALDTAE KSTGSGGKKR GAAQLRVFNL GNTSPVPVTD LVSILERLLK VKAKRNMMKL PRNGDVPFTH ANISSAQREF
401: GYKPSTDLQT GLKKFVRWYL GYYKQGGKKV AAAA

Arabidopsis Description

GAE2UDP-glucuronate 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC1]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.