Factsheet for TraesCS7D01G154100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G056200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	99.77	97.52
TraesCS7A01G152300.1	Wheat	endoplasmic reticulum	99.77	97.52
HORVU7Hr1G031270.1	Barley	endoplasmic reticulum	99.77	97.52
Zm00001d037087_P001	Maize	endoplasmic reticulum	94.46	92.95
OQU75981	Sorghum	endoplasmic reticulum	94.23	92.73
Zm00001d045078_P001	Maize	extracellular, golgi	87.07	91.28
Os06t0187200-01	Rice	golgi, peroxisome	64.2	89.97
TraesCS6D01G335600.1	Wheat	plastid	87.53	86.53
GSMUA_Achr3P04850_001	Banana	endoplasmic reticulum	76.67	80.19
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, golgi	74.83	80.0
GSMUA_Achr9P13500_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	76.67	80.0
GSMUA_Achr4P02040_001	Banana	endoplasmic reticulum	74.6	79.95
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	78.52	78.89
KRH02967	Soybean	nucleus	78.06	78.42
AT4G30440.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	76.91	77.62
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	76.67	77.39
CDY28188	Canola	cytosol, endoplasmic reticulum, golgi, plastid	76.67	77.39
CDY70926	Canola	cytosol, endoplasmic reticulum, golgi, plastid	76.67	77.39
CDX72242	Canola	cytosol, endoplasmic reticulum, golgi, plastid	76.67	77.21
CDY39205	Canola	cytosol, endoplasmic reticulum, golgi, plastid	76.44	76.98
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	75.75	76.28
PGSC0003DMT400029181	Potato	cytosol, golgi, peroxisome	73.44	74.82
Solyc07g006220.1.1	Tomato	nucleus	73.44	74.82
PGSC0003DMT400020223	Potato	endoplasmic reticulum	74.36	74.71
Solyc12g010540.1.1	Tomato	endoplasmic reticulum	73.44	73.61
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, nucleus	58.43	65.71
GSMUA_Achr7P16250_001	Banana	cytosol, endoplasmic reticulum, golgi	74.13	62.82
TraesCS4D01G224000.1	Wheat	plastid	61.66	55.39
TraesCS5D01G288700.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	59.35	53.43
TraesCS7D01G257800.1	Wheat	plastid	60.05	53.06
TraesCS5D01G321100.1	Wheat	cytosol	22.4	26.29
TraesCS1D01G451900.1	Wheat	endoplasmic reticulum, golgi	19.4	23.73
TraesCS5D01G188200.1	Wheat	plastid	20.09	23.2
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	21.02	22.47
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	20.32	21.36
TraesCS1D01G315500.1	Wheat	cytosol, mitochondrion, plastid	17.32	20.38
TraesCS5D01G298700.1	Wheat	mitochondrion	19.4	19.95
TraesCS5D01G032700.1	Wheat	cytosol, mitochondrion, plastid	20.79	13.49
TraesCS4D01G206000.1	Wheat	mitochondrion	20.09	12.76
TraesCS6D01G238800.1	Wheat	peroxisome	3.0	4.33

Protein Annotations

EnsemblPlants:TraesCS7D01G154100.1	EnsemblPlantsGene:TraesCS7D01G154100	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016857	GO:GO:0050662
InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PANTHER:PTHR43574	PANTHER:PTHR43574:SF17	PFAM:PF01370
PRINTS:PR01713	SEG:seg	SUPFAM:SSF51735	TMHMM:TMhelix	MapMan:3.13.4.1	:

Description

No Description!

Coordinates

chr7D:-:101781859..101783160

Molecular Weight (calculated)

47580.9 Da

IEP (calculated)

10.034

GRAVY (calculated)

-0.132

Length

433 amino acids

Sequence
(BLAST)

001: MLPSTPGKVK IERAGAMTRQ LHRCFASTGT MFLWALFLVA MTATYLSFHS FVDTSSRYFA ASWGGLHWER QIRASASPRR PPGSAEGAGL SVLVTGAAGF
101: VGTHCSLALR KRGDGVVGID NFNKYYDPSL KKARRALLAS HGVFVVEGDI NDGRLLTKLF DVVPFTHVLH LAAQAGVRYA MENPASYVHS NIAGLVSLLE
201: ACKEADPQPA VVWASSSSVY GLNDAVPFSE AHRTDRPASL YAATKKAGEE ITHTYNHIYG LSVTGLRFFT VYGPWGRPDM AYFSFTRNIL QGKPITVYRG
301: RDHVDLARDF TYIDDIVRGC LASLDTAGRS TGTGGRKRGP APYRIFNLGN TAPVTVPTLV SILERYLRVN AKRNVVEMPG NGDVPFTHAN ISLAREQLGY
401: KPTTSLEMGL KKFVRWYLSY YGYNRGTQAF NNL

Best Arabidopsis Sequence Match ( AT2G45310.1 )
(BLAST)

001: MSRLDDIPSS PGKFKMEKSS YLHRLRFQSS LTKFAFFSFF LLCLISLLFL RSPPSINPSS PSDPSRRSLR TNTYGGPAWE KRLRSSARIR TSTNNGITVL
101: VTGAAGFVGT HVSAALKRRG DGVIGLDNFN DYYDPSLKRA RRALLERSGI FIVEGDINDV ELLRKLFKIV SFTHVMHLAA QAGVRYAMEN PSSYVHSNIA
201: GFVNLLEICK SVNPQPAIVW ASSSSVYGLN TKVPFSEKDK TDQPASLYAA TKKAGEEIAH TYNHIYGLSL TGLRFFTVYG PWGRPDMAYF FFTKDILKGK
301: SISIFESANH GTVARDFTYI DDIVKGCLAA LDTAEKSTGS GGKKRGPAQL RVFNLGNTSP VPVSDLVRIL ERQLKVKAKK NLIKMPRNGD VPFTHANISL
401: AQRELGYKPT TDLQTGLKKF VRWYLSYYSG DKKAAAR

Arabidopsis Description

GAE4UDP-glucuronate 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:O22141]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.