Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 100.0 | 100.0 |
| Bra011194.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi, plastid | 99.77 | 99.77 |
| AT4G30440.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 98.83 | 98.83 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 97.67 | 97.44 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 97.2 | 96.98 |
| KRH02967 | Soybean | nucleus | 88.81 | 88.4 |
| KRH72376 | Soybean | endoplasmic reticulum, mitochondrion | 88.11 | 87.7 |
| PGSC0003DMT400029181 | Potato | cytosol, golgi, peroxisome | 85.08 | 85.88 |
| Solyc07g006220.1.1 | Tomato | nucleus | 84.38 | 85.18 |
| PGSC0003DMT400020223 | Potato | endoplasmic reticulum | 82.75 | 82.37 |
| GSMUA_Achr4P02040_001 | Banana | endoplasmic reticulum | 76.46 | 81.19 |
| GSMUA_Achr3P04850_001 | Banana | endoplasmic reticulum | 78.32 | 81.16 |
| Solyc12g010540.1.1 | Tomato | endoplasmic reticulum | 81.35 | 80.79 |
| Os02t0791500-01 | Rice | endoplasmic reticulum, golgi, plastid | 82.05 | 80.55 |
| Zm00001d018350_P001 | Maize | plasma membrane | 80.89 | 79.04 |
| EES05940 | Sorghum | endoplasmic reticulum, golgi, plastid | 80.89 | 79.04 |
| GSMUA_Achr9P13500_001 | Banana | cytosol, endoplasmic reticulum, golgi, plastid | 76.46 | 79.04 |
| TraesCS6A01G353200.1 | Wheat | plastid | 80.42 | 78.77 |
| TraesCS6B01G385900.1 | Wheat | plastid | 80.42 | 78.77 |
| TraesCS6D01G335600.1 | Wheat | plastid | 80.42 | 78.77 |
| HORVU5Hr1G060660.3 | Barley | mitochondrion | 71.79 | 78.37 |
| Os06t0187200-01 | Rice | golgi, peroxisome | 55.94 | 77.67 |
| GSMUA_Achr10P... | Banana | cytosol, endoplasmic reticulum, golgi | 72.73 | 77.04 |
| TraesCS7D01G154100.1 | Wheat | golgi | 77.39 | 76.67 |
| Zm00001d045078_P001 | Maize | extracellular, golgi | 73.43 | 76.27 |
| Zm00001d037087_P001 | Maize | endoplasmic reticulum | 77.86 | 75.91 |
| OQU75981 | Sorghum | endoplasmic reticulum | 77.86 | 75.91 |
| TraesCS7B01G056200.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 77.62 | 75.17 |
| TraesCS7A01G152300.1 | Wheat | endoplasmic reticulum | 77.62 | 75.17 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 69.93 | 69.77 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 68.07 | 67.13 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 67.83 | 66.9 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 65.73 | 65.73 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 66.43 | 65.52 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 66.2 | 65.44 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 65.27 | 65.27 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi, nucleus | 58.28 | 64.94 |
| GSMUA_Achr7P16250_001 | Banana | cytosol, endoplasmic reticulum, golgi | 72.96 | 61.25 |
| CDX77481 | Canola | endoplasmic reticulum | 64.34 | 60.93 |
| CDX85133 | Canola | endoplasmic reticulum | 64.34 | 60.53 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 64.34 | 60.0 |
| CDY64583 | Canola | endoplasmic reticulum | 64.34 | 60.0 |
| CDX92990 | Canola | endoplasmic reticulum | 63.4 | 59.65 |
| CDY53207 | Canola | endoplasmic reticulum | 63.17 | 59.56 |
| CDY21065 | Canola | cytosol | 21.68 | 26.5 |
| CDY31278 | Canola | cytosol | 21.68 | 26.5 |
| CDY69000 | Canola | cytosol | 20.28 | 25.97 |
| CDY47611 | Canola | golgi | 20.98 | 25.86 |
| CDY47846 | Canola | golgi | 20.51 | 25.66 |
| CDX86828 | Canola | golgi | 20.75 | 25.65 |
| CDY40862 | Canola | cytosol, golgi | 20.75 | 25.65 |
| CDY03506 | Canola | cytosol, golgi | 20.75 | 25.57 |
| CDY08378 | Canola | golgi | 20.51 | 25.51 |
| CDY47346 | Canola | cytosol | 20.75 | 25.36 |
| CDY49193 | Canola | cytosol | 20.75 | 25.36 |
| CDY50431 | Canola | cytosol | 19.35 | 23.85 |
| CDY02312 | Canola | mitochondrion | 21.68 | 22.14 |
| CDY09555 | Canola | mitochondrion | 21.45 | 21.9 |
| CDY49498 | Canola | golgi | 20.75 | 21.6 |
| CDX78998 | Canola | mitochondrion | 20.51 | 21.41 |
| CDX82768 | Canola | mitochondrion | 20.51 | 21.41 |
| CDY49015 | Canola | golgi | 20.51 | 21.36 |
| CDY52524 | Canola | golgi | 20.75 | 20.99 |
| CDY29113 | Canola | golgi | 20.05 | 20.87 |
| CDY13102 | Canola | golgi | 19.81 | 20.63 |
| CDY31644 | Canola | golgi | 20.05 | 20.28 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 18.65 | 18.69 |
| CDY71965 | Canola | cytosol, mitochondrion | 10.02 | 18.07 |
| CDY60264 | Canola | plastid | 21.68 | 15.22 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 20.51 | 13.17 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 20.28 | 13.08 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 20.28 | 13.08 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 20.28 | 12.99 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 20.28 | 12.99 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 19.35 | 12.91 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 19.35 | 12.85 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 19.35 | 12.85 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 19.11 | 12.73 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 20.28 | 12.31 |
| CDY49495 | Canola | cytosol | 2.33 | 10.2 |
| CDX81794 | Canola | plastid | 6.29 | 7.78 |
| CDY72469 | Canola | cytosol | 1.63 | 5.3 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 3.96 | 5.26 |
| CDY71423 | Canola | cytosol, nucleus | 4.43 | 4.41 |
| CDY45969 | Canola | cytosol | 2.8 | 4.04 |
| CDY45471 | Canola | cytosol | 2.8 | 4.04 |
| CDX98052 | Canola | cytosol | 2.8 | 3.72 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078JZD0 | UniProt:A0A078JZD0 | ProteinID:CDY28188.1 |
| EnsemblPlants:CDY70926 | ProteinID:CDY70926 | ProteinID:CDY70926.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016857 |
| EnsemblPlantsGene:GSBRNA2T00008409001 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim | PFAM:PF16363 | PRINTS:PR01713 |
| PANTHER:PTHR43574 | PANTHER:PTHR43574:SF17 | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI0004EC6CC6 | SEG:seg |
Description
BnaCnng70410DBnaA01g06610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZD0]
Coordinates
chrLK043768:+:1068..2357
Molecular Weight (calculated)
47522.7 Da
IEP (calculated)
10.084
GRAVY (calculated)
-0.208
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLETC
201: KSANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGSAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARKEFGYKP
401: TTDLETGLRK FVRWYLSYYG YNTKAKLVH
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLETC
201: KSANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGSAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARKEFGYKP
401: TTDLETGLRK FVRWYLSYYG YNTKAKLVH
001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH
Arabidopsis Description
GAE1GAE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXF7]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.