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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 2
  • golgi 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:golgi
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52524 Canola golgi 97.88 97.88
AT2G34850.2 Thale cress cytosol 53.07 95.34
Bra005387.1-P Field mustard golgi, mitochondrion 98.82 92.29
CDY09555 Canola mitochondrion 87.26 88.1
CDY02312 Canola mitochondrion 87.03 87.86
Solyc07g043550.2.1 Tomato cytosol, unclear 60.38 84.77
CDY71965 Canola cytosol, mitochondrion 47.41 84.45
CDX78998 Canola mitochondrion 77.83 80.29
CDX82768 Canola mitochondrion 77.59 80.05
GSMUA_Achr3P23390_001 Banana mitochondrion 78.3 79.62
KRH43065 Soybean golgi, mitochondrion, plastid 78.07 79.57
KRH59194 Soybean golgi, mitochondrion 78.07 79.57
GSMUA_Achr11P... Banana cytosol, golgi 73.11 79.28
VIT_03s0017g00980.t01 Wine grape golgi 77.59 78.9
PGSC0003DMT400041159 Potato golgi, mitochondrion 72.17 78.87
KRH36892 Soybean golgi, mitochondrion 77.12 78.8
GSMUA_Achr11P... Banana mitochondrion 77.36 78.66
Os04t0618200-02 Rice golgi 72.41 78.52
TraesCS2D01G460600.1 Wheat mitochondrion, plastid 76.18 78.4
CDY29113 Canola golgi 75.94 78.16
CDY13102 Canola golgi 75.71 77.91
HORVU2Hr1G104110.1 Barley mitochondrion, plastid 75.71 77.91
TraesCS2B01G482000.1 Wheat golgi 75.71 77.91
KRH11871 Soybean golgi, plastid 76.18 77.83
TraesCS2A01G460400.1 Wheat unclear 75.47 77.67
Os07t0139400-01 Rice plasma membrane 76.65 77.2
TraesCS5A01G291300.1 Wheat golgi 76.42 76.96
TraesCS5D01G298700.1 Wheat mitochondrion 76.42 76.96
GSMUA_Achr4P31860_001 Banana mitochondrion 75.47 76.92
TraesCS7D01G307500.1 Wheat golgi, mitochondrion 73.35 76.79
TraesCS5B01G290300.1 Wheat mitochondrion 76.18 76.72
CDY49015 Canola golgi 74.53 76.7
Os08t0129700-01 Rice mitochondrion 73.35 76.6
HORVU7Hr1G074300.2 Barley golgi 73.11 76.54
GSMUA_Achr8P33320_001 Banana mitochondrion 75.24 76.5
CDY49498 Canola golgi 74.29 76.46
EER95001 Sorghum mitochondrion 73.35 76.41
HORVU5Hr1G077110.3 Barley mitochondrion 75.71 76.25
TraesCS7A01G311100.1 Wheat golgi 72.64 76.05
Solyc12g006410.1.1 Tomato unclear 70.99 75.44
TraesCS7B01G210700.2 Wheat golgi 73.35 75.3
KXG27129 Sorghum mitochondrion, plastid 73.58 75.18
EER95854 Sorghum mitochondrion, plastid 75.47 74.42
CDY08378 Canola golgi 35.38 43.48
CDY47846 Canola golgi 35.14 43.44
CDY47611 Canola golgi 35.14 42.82
CDY03506 Canola cytosol, golgi 34.91 42.53
CDX86828 Canola golgi 34.43 42.07
CDY50431 Canola cytosol 34.43 41.95
CDY40862 Canola cytosol, golgi 34.2 41.79
Zm00001d017999_P002 Maize mitochondrion 28.54 38.91
CDY69000 Canola cytosol 30.42 38.51
CDY31278 Canola cytosol 31.6 38.18
CDY21065 Canola cytosol 31.6 38.18
CDY47346 Canola cytosol 31.6 38.18
CDY49193 Canola cytosol 31.6 38.18
Zm00001d010657_P001 Maize golgi, plastid, vacuole 31.13 38.15
CDY49495 Canola cytosol 6.37 27.55
CDY60264 Canola plastid 32.55 22.59
CDX97356 Canola cytosol, endoplasmic reticulum, golgi 22.17 21.91
CDY04398 Canola cytosol, endoplasmic reticulum, golgi 21.93 21.68
CDX94504 Canola cytosol, endoplasmic reticulum, peroxisome 22.17 21.61
CDX86716 Canola cytosol, endoplasmic reticulum, peroxisome 21.93 21.43
CDY63064 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.75 20.47
CDX95646 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.99 20.46
CDY67756 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.99 20.46
CDY70926 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.28 20.05
CDY28188 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.28 20.05
CDY39205 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.28 20.0
CDX72242 Canola cytosol, endoplasmic reticulum, golgi, plastid 20.28 20.0
CDY64583 Canola endoplasmic reticulum 21.23 19.57
CDY18087 Canola cytosol, endoplasmic reticulum, golgi 21.23 19.57
CDX92990 Canola endoplasmic reticulum 20.99 19.52
CDX77481 Canola endoplasmic reticulum 20.75 19.43
CDY53207 Canola endoplasmic reticulum 20.75 19.34
CDX85133 Canola endoplasmic reticulum 20.75 19.3
CDY25850 Canola cytosol, mitochondrion, peroxisome 18.63 18.46
CDY45116 Canola cytosol, mitochondrion, peroxisome 20.52 13.08
CDY24092 Canola cytosol, mitochondrion, peroxisome 20.52 13.08
CDY60210 Canola cytosol, mitochondrion, peroxisome 20.28 12.87
CDY35137 Canola cytosol, mitochondrion, plastid 20.28 12.84
CDY40003 Canola cytosol, mitochondrion, plastid 20.28 12.84
CDX88455 Canola cytosol, peroxisome, plastid 20.99 12.59
CDX97601 Canola cytosol, mitochondrion, plastid 18.87 12.38
CDX98494 Canola cytosol, mitochondrion, plastid 18.87 12.38
CDY20084 Canola cytosol, mitochondrion, peroxisome 18.63 12.27
CDY32340 Canola cytosol, mitochondrion, peroxisome 18.4 12.13
CDX81794 Canola plastid 6.37 7.78
CDY71423 Canola cytosol, nucleus 5.19 5.1
CDX98052 Canola cytosol 3.07 4.02
CDY57072 Canola cytosol, extracellular, peroxisome 3.07 4.02
CDY72469 Canola cytosol 1.18 3.79
CDY45471 Canola cytosol 2.59 3.7
CDY45969 Canola cytosol 2.59 3.7
Protein Annotations
KEGG:00052+5.1.3.2KEGG:00520+5.1.3.2MapMan:3.13.7.1Gene3D:3.40.50.720Gene3D:3.90.25.10GO:A0A078H2K6
UniProt:A0A078H2K6EnsemblPlants:CDY31644ProteinID:CDY31644ProteinID:CDY31644.1GO:GO:0003674GO:GO:0003824
GO:GO:0003978GO:GO:0005975GO:GO:0006012GO:GO:0008150GO:GO:0008152GO:GO:0016853
EnsemblPlantsGene:GSBRNA2T00050251001InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfPFAM:PF16363PANTHER:PTHR43349PANTHER:PTHR43349:SF14
MetaCyc:PWY-3821MetaCyc:PWY-6317MetaCyc:PWY-6397MetaCyc:PWY-6527MetaCyc:PWY-7328MetaCyc:PWY-7344
SUPFAM:SSF51735TIGRFAMs:TIGR01179InterPro:UDP_G4EUniPathway:UPA00214UniParc:UPI0004EF40BASEG:seg
Description
BnaA05g09030DBnaA05g09030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2K6]
Coordinates
chrLK032277:-:121393..124260
Molecular Weight (calculated)
46966.1 Da
IEP (calculated)
8.194
GRAVY (calculated)
-0.268
Length
424 amino acids
Sequence
(BLAST)
001: MLNLGRARIQ GRQNRSMSFE GLDYADQKKN NDYTGKIVLV ISLTAMCILV LKQSPTFDTP SVFSQHEPGV THVLVTGGAG YIGSHAALRL LRDSYRVTIV
101: DNLSRGSLGA VKILQQLFHE PGRLQFIYAD LGDPHAVNKI FSENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPEKMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSNM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIIPGLQI KGTDYKTLDG
301: TCVRDYIDVT DLVDAHVKAL EKAKPSRVGI FNVGTGKAGS SVKEFVEACK KATGVDIKVD YLERRAGDYA EVYSDPRKIK EELNWTAKHT NLKESLETAW
401: RWQKLHRNGY ESSSFSSTSL FSAY
Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)
001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY
Arabidopsis Description
MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.