Factsheet for Os04t0618200-02

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 3
mitochondrion 1
golgi 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27129	Sorghum	mitochondrion, plastid	90.03	84.82
TraesCS2A01G460400.1	Wheat	unclear	89.26	84.71
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	89.26	84.71
TraesCS2B01G482000.1	Wheat	golgi	89.0	84.47
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	88.75	84.22
Solyc07g043550.2.1	Tomato	cytosol, unclear	63.68	82.45
Os08t0129700-01	Rice	mitochondrion	82.86	79.8
PGSC0003DMT400080637	Potato	golgi	81.33	79.5
CDY71965	Canola	cytosol, mitochondrion	48.34	79.41
AT2G34850.2	Thale cress	cytosol	47.31	78.39
GSMUA_Achr8P33320_001	Banana	mitochondrion	82.86	77.7
KRH36892	Soybean	golgi, mitochondrion	81.84	77.11
KRH11871	Soybean	golgi, plastid	81.07	76.39
PGSC0003DMT400041159	Potato	golgi, mitochondrion	75.45	76.03
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	81.07	76.02
Solyc12g006410.1.1	Tomato	unclear	77.49	75.94
Solyc02g030230.2.1	Tomato	mitochondrion	80.56	75.72
AT4G20460.1	Thale cress	golgi, mitochondrion	79.54	75.67
CDX78998	Canola	mitochondrion	79.28	75.43
Bra032409.1-P	Field mustard	mitochondrion	80.82	75.42
PGSC0003DMT400054459	Potato	mitochondrion	80.31	75.3
CDY09555	Canola	mitochondrion	80.82	75.24
CDY02312	Canola	mitochondrion	80.82	75.24
CDX82768	Canola	mitochondrion	79.03	75.18
KRH59194	Soybean	golgi, mitochondrion	79.28	74.52
CDY29113	Canola	golgi	78.52	74.51
Bra027557.1-P	Field mustard	golgi	78.52	74.51
AT1G30620.4	Thale cress	golgi, mitochondrion	79.8	74.46
Bra033746.1-P	Field mustard	golgi	78.26	74.27
CDY13102	Canola	golgi	78.26	74.27
Os07t0139400-01	Rice	plasma membrane	79.8	74.11
CDY49498	Canola	golgi	78.01	74.03
CDY49015	Canola	golgi	78.01	74.03
Bra020917.1-P	Field mustard	golgi, mitochondrion	77.75	73.97
KRH43065	Soybean	golgi, mitochondrion, plastid	78.26	73.56
CDY52524	Canola	golgi	79.03	72.88
CDY31644	Canola	golgi	78.52	72.41
AT5G44480.1	Thale cress	mitochondrion	78.52	70.41
Zm00001d026311_P001	Maize	golgi, mitochondrion, plastid	90.28	69.9
Bra005387.1-P	Field mustard	golgi, mitochondrion	78.52	67.62
Zm00001d002292_P004	Maize	endoplasmic reticulum, golgi	77.24	66.37
Bra013466.1-P	Field mustard	mitochondrion	77.49	65.44
Os05t0595100-01	Rice	plastid	37.08	40.96
Os09t0323000-01	Rice	cytosol	37.08	39.3
Os08t0374800-01	Rice	golgi	39.64	37.99
Os09t0526700-01	Rice	cytosol	35.29	37.0
Os06t0187200-01	Rice	golgi, peroxisome	16.62	21.04
Os02t0791500-01	Rice	endoplasmic reticulum, golgi, plastid	22.51	20.14
Os09t0504000-01	Rice	cytosol, endoplasmic reticulum, golgi	23.02	18.07
Os08t0526100-01	Rice	plastid	21.99	17.99
Os03t0249500-01	Rice	plastid	22.25	17.98
Os03t0278200-01	Rice	nucleus, plasma membrane	22.51	13.04
Os05t0203400-00	Rice	plastid	10.74	12.57
Os02t0678400-01	Rice	plasma membrane	3.84	4.82
Os03t0249400-01	Rice	nucleus, plasma membrane	0.26	0.79

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:4337011
EMBL:AB097461	EMBL:AK065875	EMBL:AK102657	ProteinID:BAS91033.1	ProteinID:CAD41738.2	ProteinID:CAD41895.2
ProteinID:EEE61700.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006012	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016853	GO:GO:0032580	GO:GO:0033358	GO:GO:0045227	GO:GO:0050373
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os04g0618200	EnsemblPlants:Os04t0618200-02	PFAM:PF16363	PANTHER:PTHR43349
PANTHER:PTHR43349:SF14	UniProt:Q8H0B6	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	TMHMM:TMhelix	InterPro:UDP_G4E
UniParc:UPI00000ADBFE	RefSeq:XP_015634966.1	:	:	:	:

Description

UEL-2Similar to cDNA clone:J013046D23, full insert sequence. (Os04t0618200-01);Similar to H0313F03.11 protein. (Os04t0618200-02)

Coordinates

chr4:+:31403388..31407274

Molecular Weight (calculated)

42786.2 Da

IEP (calculated)

8.420

GRAVY (calculated)

-0.153

Length

391 amino acids

Sequence
(BLAST)

001: MDFGDSRRKP NVVGKFTVAV ALTVMCIIVL KQSPGFTSTS VFSRHEIGVT HVLVTGGAGY IGSHATLRLL RDNYRVTIVD NLSRGNMGAV RVLQRLFPEP
101: GRLQFIYADL GDAKAVNKIF SENAFDAVMH FAAVAYVGES TLEPLRYYHN ITSNTLTVLE AMAAYNVKTL IYSSTCATYG EPDTMPITEA TPQNPINPYG
201: KAKKMAEDII LDFSKRSEMA VMILRYFNVI GSDPGGRLGE APRPELREHG RISGACFDAA LGIIPGLKVR GTDYPTADGT CIRDYIDVTD LVDAHVKALD
301: KAQPGKVGIY NVGTGHGRSV KEFVEACKSA TGASIKVSFL TRRPGDYAEV YSDPSKIHDE LNWTARYIDL RESLSTAWKW QKAHPNGYGS A

Best Arabidopsis Sequence Match ( AT4G20460.1 )
(BLAST)

001: MLSFSRARSQ GRNTRPLGGG MEYLEPKRKS NVMGKIILVV SLTALCIFML KHAPSFTSPT AFSRSEEGVT HVLVTGGAGY IGSHAALRLL KDSYRVTIVD
101: NLSRGNLGAV KVLQGLFPEP GRLQFIYADL GDAKAVDKIF SENAFDAVMH FAAVAYVGES TLDPLKYYHN ITSNTLVVLE AVARHKVKKL IYSSTCATYG
201: EPDKMPIVEV TPQVPINPYG KAKKMAEDMI LDFSKNSDMA VMILRYFNVI GSDPEGRLGE APKPELREHG RISGACFDAA RGVIPGLQVK GTDYKTGDGT
301: CVRDYIDVTD LVDAHVKALE KAKPRNVGIY NVGTGKGRSV KEFVEACKKA TGVDIKVDFL PRRPGDYAEV YSDPAKILRD LNWSARYTNL QESLEVAWKW
401: QKTHPHGYAS S

Arabidopsis Description

Probable UDP-arabinose 4-epimerase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUN3]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.