Factsheet for Bra032409.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 6
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02312	Canola	mitochondrion	100.0	99.76
AT1G30620.4	Thale cress	golgi, mitochondrion	95.7	95.7
Solyc07g043550.2.1	Tomato	cytosol, unclear	62.29	86.42
KRH36892	Soybean	golgi, mitochondrion	81.15	81.93
Bra005387.1-P	Field mustard	golgi, mitochondrion	88.54	81.72
KRH11871	Soybean	golgi, plastid	80.67	81.45
KRH43065	Soybean	golgi, mitochondrion, plastid	80.67	81.25
KRH59194	Soybean	golgi, mitochondrion	80.67	81.25
PGSC0003DMT400041159	Potato	golgi, mitochondrion	74.94	80.93
Os04t0618200-02	Rice	golgi	75.42	80.82
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	79.24	80.58
Bra020917.1-P	Field mustard	golgi, mitochondrion	79.0	80.54
VIT_03s0017g00980.t01	Wine grape	golgi	79.95	80.34
Bra027557.1-P	Field mustard	golgi	78.76	80.1
GSMUA_Achr3P23390_001	Banana	mitochondrion	79.47	79.86
TraesCS2B01G482000.1	Wheat	golgi	78.52	79.85
TraesCS2A01G460400.1	Wheat	unclear	78.52	79.85
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	78.28	79.61
GSMUA_Achr11P...	Banana	cytosol, golgi	74.22	79.54
GSMUA_Achr11P...	Banana	mitochondrion	78.76	79.14
Bra033746.1-P	Field mustard	golgi	77.8	79.13
Os08t0129700-01	Rice	mitochondrion	76.37	78.82
EER95001	Sorghum	mitochondrion	76.13	78.38
HORVU7Hr1G074300.2	Barley	golgi	75.66	78.27
KXG27129	Sorghum	mitochondrion, plastid	77.33	78.07
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	75.42	78.02
Os07t0139400-01	Rice	plasma membrane	78.28	77.91
GSMUA_Achr8P33320_001	Banana	mitochondrion	77.33	77.7
TraesCS7A01G311100.1	Wheat	golgi	74.94	77.53
GSMUA_Achr4P31860_001	Banana	mitochondrion	76.85	77.4
TraesCS7B01G210700.2	Wheat	golgi	75.42	76.51
HORVU5Hr1G077110.3	Barley	mitochondrion	76.61	76.25
Solyc12g006410.1.1	Tomato	unclear	72.55	76.19
TraesCS5A01G291300.1	Wheat	golgi	76.37	76.01
TraesCS5B01G290300.1	Wheat	mitochondrion	76.13	75.77
TraesCS5D01G298700.1	Wheat	mitochondrion	76.13	75.77
EER95854	Sorghum	mitochondrion, plastid	76.85	74.88
Bra013466.1-P	Field mustard	mitochondrion	79.24	71.71
Bra027732.1-P	Field mustard	golgi	35.56	43.44
Bra019257.1-P	Field mustard	plastid	35.32	42.53
Bra035262.1-P	Field mustard	golgi	35.08	42.36
Bra013744.1-P	Field mustard	cytosol, golgi	35.08	42.24
Bra019785.1-P	Field mustard	cytosol	32.94	41.19
Zm00001d017999_P002	Maize	mitochondrion	29.83	40.19
Bra016757.1-P	Field mustard	cytosol	33.41	39.89
Bra027626.1-P	Field mustard	cytosol	32.22	38.46
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	31.26	37.86
Bra039253.1-P	Field mustard	cytosol	30.79	37.18
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	22.91	22.38
Bra030933.1-P	Field mustard	cytosol	9.79	22.16
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	22.2	21.68
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	22.43	21.61
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	21.96	21.4
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	23.15	21.09
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	22.67	20.83
Bra014987.1-P	Field mustard	endoplasmic reticulum	22.43	20.7
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	21.0	20.47
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	21.24	20.46
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.72	13.68
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	21.72	13.58
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.24	13.38
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	21.24	13.24
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.53	12.87
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	19.09	12.42
Bra019776.1-P	Field mustard	cytosol	3.1	4.05
Bra027005.1-P	Field mustard	cytosol	2.39	3.37

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra032409
EnsemblPlants:Bra032409.1	EnsemblPlants:Bra032409.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006012
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009832	GO:GO:0009987	GO:GO:0016853
GO:GO:0019567	GO:GO:0050373	UniProt:M4EUC7	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363
PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI00025424EC
SEG:seg	:	:	:	:	:

Description

AT1G30620 (E=2e-229) HSR8, MUR4, UXE1 | MUR4 (MURUS 4); UDP-arabinose 4-epimerase/ catalytic

Coordinates

chrA09:-:21653829..21656064

Molecular Weight (calculated)

46294.5 Da

IEP (calculated)

9.505

GRAVY (calculated)

-0.266

Length

419 amino acids

Sequence
(BLAST)

001: MFNFTRARSQ ARQNRSLSLG GLDYADPKKK NNYFGKFLLT ASLTALCIFM LKQSPTFNTP SVFSIHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLGA VKVLQELFPE PGRLQFIYAD LGDAKAVNKI FSENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDTMPITE VTPQVPINPY GKAKKMAEDI ILDFSKNSNM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTSDG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRPGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG STSSSVSVY

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.