CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 3
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0139400-01	Rice	plasma membrane	89.07	90.97
TraesCS5D01G298700.1	Wheat	mitochondrion	86.74	88.6
TraesCS5A01G291300.1	Wheat	golgi	86.51	88.36
HORVU5Hr1G077110.3	Barley	mitochondrion	86.51	88.36
TraesCS5B01G290300.1	Wheat	mitochondrion	85.81	87.65
CDY71965	Canola	cytosol, mitochondrion	45.58	82.35
Solyc07g043550.2.1	Tomato	cytosol, unclear	57.44	81.79
AT2G34850.2	Thale cress	cytosol	44.88	81.78
GSMUA_Achr4P31860_001	Banana	mitochondrion	78.14	80.77
VIT_10s0003g05640.t01	Wine grape	golgi	77.91	80.14
EER95001	Sorghum	mitochondrion	74.88	79.12
KRH36892	Soybean	golgi, mitochondrion	75.35	78.07
KRH11871	Soybean	golgi, plastid	74.88	77.59
CDX78998	Canola	mitochondrion	73.72	77.13
PGSC0003DMT400041159	Potato	golgi, mitochondrion	69.53	77.06
CDY09555	Canola	mitochondrion	75.12	76.9
CDX82768	Canola	mitochondrion	73.49	76.89
Bra032409.1-P	Field mustard	mitochondrion	74.88	76.85
KRH59194	Soybean	golgi, mitochondrion	74.19	76.68
CDY02312	Canola	mitochondrion	74.88	76.67
AT4G20460.1	Thale cress	golgi, mitochondrion	73.26	76.64
PGSC0003DMT400080637	Potato	golgi	71.16	76.5
CDY52524	Canola	golgi	74.88	75.94
AT1G30620.4	Thale cress	golgi, mitochondrion	73.95	75.89
KRH43065	Soybean	golgi, mitochondrion, plastid	73.26	75.72
Bra020917.1-P	Field mustard	golgi, mitochondrion	72.33	75.67
CDY29113	Canola	golgi	72.33	75.49
CDY31644	Canola	golgi	74.42	75.47
KXG27129	Sorghum	mitochondrion, plastid	72.79	75.42
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	73.02	75.3
Solyc02g030230.2.1	Tomato	mitochondrion	72.56	75.0
Bra027557.1-P	Field mustard	golgi	71.86	75.0
CDY13102	Canola	golgi	71.86	75.0
PGSC0003DMT400054459	Potato	mitochondrion	72.56	74.82
Bra033746.1-P	Field mustard	golgi	71.16	74.27
CDY49015	Canola	golgi	70.93	74.03
Solyc12g006410.1.1	Tomato	unclear	68.14	73.43
CDY49498	Canola	golgi	70.23	73.3
Bra005387.1-P	Field mustard	golgi, mitochondrion	75.35	71.37
AT5G44480.1	Thale cress	mitochondrion	72.09	71.1
Bra013466.1-P	Field mustard	mitochondrion	72.56	67.39
EER94859	Sorghum	extracellular, golgi	34.42	41.69
EER98731	Sorghum	plastid	34.65	40.71
KXG36042	Sorghum	cytosol	33.49	39.56
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	35.35	35.93
EES05940	Sorghum	endoplasmic reticulum, golgi, plastid	21.16	20.73
OQU75981	Sorghum	endoplasmic reticulum	20.0	19.55
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	20.7	18.02
EES14210	Sorghum	cytosol, extracellular, golgi, plastid	19.77	17.75
EER95171	Sorghum	plastid	19.77	17.71
EER95086	Sorghum	cytosol, mitochondrion, plastid	21.4	13.69
EER95078	Sorghum	cytosol, mitochondrion, peroxisome	21.16	13.54
KXG21627	Sorghum	mitochondrion	20.47	12.83
EES07456	Sorghum	cytosol, peroxisome, plastid	2.33	3.26

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:8079909
UniProt:C5X9F4	EnsemblPlants:EER95854	ProteinID:EER95854	ProteinID:EER95854.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349	PANTHER:PTHR43349:SF18	MetaCyc:PWY-3821
MetaCyc:PWY-6317	MetaCyc:PWY-6397	MetaCyc:PWY-6527	MetaCyc:PWY-7328	MetaCyc:PWY-7344	EnsemblPlantsGene:SORBI_3002G029800
SUPFAM:SSF51735	unigene:Sbi.11976	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI0001A82E9B	RefSeq:XP_002459333.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:2766405..2769833

Molecular Weight (calculated)

47299.1 Da

IEP (calculated)

8.822

GRAVY (calculated)

-0.235

Length

430 amino acids

Sequence
(BLAST)

001: MLPSTRGSRP PQRPAARSCS SALSEIMDLS SSDPKRKPRC LSKVVMLALL AAMCVVMLTQ PPCHRTRPPT PTLFSIHEPG VTHVLVTGGA GYIGSHAALR
101: LLKDSFRVTI VDNLSRGNIG AIKVLQNLFP EPGRLQFIQA DLGDPEAVNR IFAENAFDAV MHFAAVAYVG ESTLEPLRYY HNITANTLVV LEAMATHNVK
201: TLIYSSTCAT YGEPEKMPIT EGTPQFPINP YGKAKKMAED IILDFSKSKR SDMAVMILRY FNVIGSDPEG RLGEAPRPEL REHGRISGAC FDAALGIIPG
301: LKVKGTDYET PDGTCVRDYI DVTDLVDAHV KALNKAQRGR VGIYNVGTGK GRSVKEFVDA CKKATGVDIK VDYFPRRPGD YAEVYSDPAK INKELNWTAQ
401: RTDLHESLRV AWTWQKAHRS GYEPPQAMIL

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.