Factsheet for PGSC0003DMT400054459

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 5
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	98.32	98.32
PGSC0003DMT400080637	Potato	golgi	85.85	89.5
KRH11871	Soybean	golgi, plastid	81.06	81.45
KRH36892	Soybean	golgi, mitochondrion	80.82	81.2
KRH59194	Soybean	golgi, mitochondrion	80.58	80.77
CDY71965	Canola	cytosol, mitochondrion	46.04	80.67
Os04t0618200-02	Rice	golgi	75.3	80.31
KRH43065	Soybean	golgi, mitochondrion, plastid	79.62	79.81
Os08t0129700-01	Rice	mitochondrion	77.22	79.31
GSMUA_Achr11P...	Banana	mitochondrion	78.18	78.18
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	77.22	78.16
AT4G20460.1	Thale cress	golgi, mitochondrion	76.98	78.1
GSMUA_Achr3P23390_001	Banana	mitochondrion	77.94	77.94
CDX78998	Canola	mitochondrion	76.74	77.86
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	75.54	77.78
HORVU7Hr1G074300.2	Barley	golgi	75.54	77.78
TraesCS2B01G482000.1	Wheat	golgi	76.74	77.67
EER95001	Sorghum	mitochondrion	75.78	77.64
CDX82768	Canola	mitochondrion	76.5	77.62
GSMUA_Achr11P...	Banana	cytosol, golgi	72.66	77.49
GSMUA_Achr8P33320_001	Banana	mitochondrion	77.46	77.46
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	76.5	77.43
TraesCS2A01G460400.1	Wheat	unclear	76.5	77.43
TraesCS7A01G311100.1	Wheat	golgi	75.06	77.28
Bra027557.1-P	Field mustard	golgi	76.02	76.94
CDY29113	Canola	golgi	76.02	76.94
KXG27129	Sorghum	mitochondrion, plastid	76.5	76.87
Bra033746.1-P	Field mustard	golgi	75.78	76.7
CDY13102	Canola	golgi	75.78	76.7
CDY49015	Canola	golgi	75.54	76.46
Bra020917.1-P	Field mustard	golgi, mitochondrion	75.3	76.4
TraesCS7B01G210700.2	Wheat	golgi	75.54	76.27
CDY49498	Canola	golgi	75.06	75.97
Os07t0139400-01	Rice	plasma membrane	76.5	75.77
HORVU5Hr1G077110.3	Barley	mitochondrion	76.26	75.53
PGSC0003DMT400041159	Potato	golgi, mitochondrion	70.26	75.52
GSMUA_Achr4P31860_001	Banana	mitochondrion	75.3	75.48
TraesCS5A01G291300.1	Wheat	golgi	76.02	75.3
TraesCS5D01G298700.1	Wheat	mitochondrion	75.78	75.06
TraesCS5B01G290300.1	Wheat	mitochondrion	75.78	75.06
AT5G44480.1	Thale cress	mitochondrion	76.5	73.17
EER95854	Sorghum	mitochondrion, plastid	74.82	72.56
Bra013466.1-P	Field mustard	mitochondrion	75.06	67.6
PGSC0003DMT400012829	Potato	cytosol, extracellular, golgi	35.97	43.1
PGSC0003DMT400031994	Potato	golgi	35.25	41.88
PGSC0003DMT400007898	Potato	cytosol	32.37	38.46
Zm00001d017999_P002	Maize	mitochondrion	28.3	37.94
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	30.46	36.71
PGSC0003DMT400059215	Potato	plastid	13.43	25.11
PGSC0003DMT400029181	Potato	cytosol, golgi, peroxisome	22.54	22.12
PGSC0003DMT400020223	Potato	endoplasmic reticulum	22.78	22.04
PGSC0003DMT400010106	Potato	cytosol, endoplasmic reticulum, golgi, plastid	23.26	21.75
PGSC0003DMT400040718	Potato	cytosol, endoplasmic reticulum, golgi	22.06	21.2
PGSC0003DMT400018060	Potato	cytosol, endoplasmic reticulum, golgi, plastid	22.06	21.15
PGSC0003DMT400053071	Potato	cytosol, endoplasmic reticulum, golgi, plastid	21.82	20.31
PGSC0003DMT400066897	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	20.62	19.95
PGSC0003DMT400024810	Potato	cytosol, endoplasmic reticulum, golgi, plastid	20.62	19.77
PGSC0003DMT400011867	Potato	cytosol, endoplasmic reticulum, golgi	21.34	19.6
PGSC0003DMT400059216	Potato	cytosol	5.52	15.33
PGSC0003DMT400075973	Potato	cytosol, mitochondrion, peroxisome	20.62	13.15
PGSC0003DMT400018192	Potato	cytosol, mitochondrion, plastid	19.9	12.31
PGSC0003DMT400054754	Potato	cytosol, mitochondrion, plastid	19.18	11.87
PGSC0003DMT400058533	Potato	cytosol	2.64	3.65

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	EntrezGene:102581884	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10
GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005575	GO:GO:0005975	GO:GO:0006012
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	UniProt:M1BWD3
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	EnsemblPlantsGene:PGSC0003DMG401021138	PGSC:PGSC0003DMG401021138	EnsemblPlants:PGSC0003DMT400054459
PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	TMHMM:TMhelix	InterPro:UDP_G4E
UniParc:UPI0002959E49	RefSeq:XP_006353041.1	RefSeq:XP_006353042.1	RefSeq:XP_015166656.1	:	:

Description

UDP-glucose 4-epimerase [Source:PGSC_GENE;Acc:PGSC0003DMG401021138]

Coordinates

chr2:-:28691544..28698205

Molecular Weight (calculated)

45887.3 Da

IEP (calculated)

9.386

GRAVY (calculated)

-0.213

Length

417 amino acids

Sequence
(BLAST)

001: MLGLGRTRAQ TRSSRSMSLG GMDYADPKKK SNFVGKILMA AVLTALCILM LKQSPTFNTP SAFSRHQPGV IHVLVTGGAG YIGSHAALRL LKENYRVTIV
101: DNLSRGNIGA VRILQELFPE PGRLQFIYAD LGDAKVVHQI FSQNAFDAVM HFAAVAYVGE STLHPLKYYH NITSNTLTVL EAMSAHGVPT LIYSSTCATY
201: GEPEKMPITE ETPQLPINPY GKAKKMAEDI ILDFHKNSNM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACYDA ARGILPDLKV RGTDYKTTDG
301: TCIRDYIDVT DLVDAHVKAL EKSRPGKVGI YNVGTGRGRS VKEFVEACKA ATGVPIKVDF LPRRPGDYAE VFSDPTKIKL ELNWTAKHTD LQESLQVAWR
401: WQKSHLNGYG SSLVKSS

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.