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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 1
  • mitochondrion 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, golgi, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:golgi
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH40009 Soybean plastid 71.3 39.07
PGSC0003DMT400066897 Potato endoplasmic reticulum, golgi, mitochondrion, plastid 75.34 38.98
PGSC0003DMT400020223 Potato endoplasmic reticulum 74.89 38.75
PGSC0003DMT400029181 Potato cytosol, golgi, peroxisome 73.54 38.59
VIT_16s0022g01450.t01 Wine grape mitochondrion 69.51 37.99
PGSC0003DMT400024810 Potato cytosol, endoplasmic reticulum, golgi, plastid 73.99 37.93
PGSC0003DMT400018060 Potato cytosol, endoplasmic reticulum, golgi, plastid 73.09 37.47
PGSC0003DMT400010106 Potato cytosol, endoplasmic reticulum, golgi, plastid 73.54 36.77
PGSC0003DMT400040718 Potato cytosol, endoplasmic reticulum, golgi 69.51 35.71
PGSC0003DMT400011867 Potato cytosol, endoplasmic reticulum, golgi 71.75 35.24
GSMUA_Achr5P18760_001 Banana endoplasmic reticulum, golgi, mitochondrion 71.75 34.86
GSMUA_Achr4P17900_001 Banana endoplasmic reticulum, mitochondrion, peroxisome 66.82 34.65
PGSC0003DMT400053071 Potato cytosol, endoplasmic reticulum, golgi, plastid 68.16 33.93
Zm00001d028427_P001 Maize plastid 66.37 30.9
TraesCS4D01G224000.1 Wheat plastid 66.37 30.71
Zm00001d047915_P001 Maize plastid 65.92 30.69
EER95171 Sorghum plastid 65.92 30.62
TraesCS4A01G080300.1 Wheat plastid 65.47 30.54
Os03t0249500-01 Rice plastid 65.47 30.17
TraesCS4B01G223700.1 Wheat plastid 66.37 30.14
HORVU4Hr1G063010.1 Barley peroxisome 65.92 28.6
PGSC0003DMT400007898 Potato cytosol 26.46 16.81
PGSC0003DMT400012829 Potato cytosol, extracellular, golgi 25.56 16.38
PGSC0003DMT400080637 Potato golgi 26.46 14.75
PGSC0003DMT400031994 Potato golgi 22.87 14.53
PGSC0003DMT400054459 Potato mitochondrion 25.11 13.43
PGSC0003DMT400041159 Potato golgi, mitochondrion 23.32 13.4
PGSC0003DMT400018192 Potato cytosol, mitochondrion, plastid 28.25 9.35
PGSC0003DMT400054754 Potato cytosol, mitochondrion, plastid 27.8 9.2
PGSC0003DMT400075973 Potato cytosol, mitochondrion, peroxisome 25.56 8.72
PGSC0003DMT400059216 Potato cytosol 4.48 6.67
PGSC0003DMT400058533 Potato cytosol 1.35 1.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400059215EnsemblPlantsGene:PGSC0003DMG401023002Gene3D:3.40.50.720InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfPANTHER:PTHR43574
PANTHER:PTHR43574:SF20PFAM:PF16363PGSC:PGSC0003DMG401023002SUPFAM:SSF51735UniParc:UPI000295BDF0UniProt:M1C3Z2
MapMan:3.13.4.1:::::
Description
UDP-glucuronate 4-epimerase 3 [Source:PGSC_GENE;Acc:PGSC0003DMG401023002]
Coordinates
chr3:+:40285849..40288285
Molecular Weight (calculated)
24653.5 Da
IEP (calculated)
10.230
GRAVY (calculated)
-0.201
Length
223 amino acids
Sequence
(BLAST)
001: MKWGSSNNTP QWEKRVRLSA RSRSGHLSVL VTGAAGFVGS HVSAALKRRG DGVVGLDNFN SYYDPSLKRA RQKLLEQKGV FVIEGDINDE KLLKKLFDIV
101: EFTHVMHLAA QAGVRYAMKN PGSYIHSNIA GLVTLFEACK SANPQPSIVW ASSSSVYGLN SKVPFSEKDQ TDQPASLYAA TKKAGEEIAH TYNHIYGLSI
201: VGFRIFFSLP MWINKSLIRT SPF
Best Arabidopsis Sequence Match ( AT1G02000.1 )
(BLAST)
001: MSHLDDIPST PGKFKMMDKS PFFLHRTRWQ SSVAKLAFWS LVFFGLLFIF FYRSPISNPD SSRRSLRTYS WGGPAWEKRV RSSARVRTRN GVSVLVTGAA
101: GFVGTHVSAA LKRRGDGVLG LDNFNDYYDT SLKRSRQALL ERSGVFIVEG DINDLSLLKK LFEVVPFTHV MHLAAQAGVR YAMENPGSYV HSNIAGFVNL
201: LEVCKSANPQ PAIVWASSSS VYGLNTKVPF SEKDRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP DMAYFFFTRD ILKGKAISIF
301: EGANHGTVAR DFTYIDDIVK GCLGALDTAE KSTGSGGKKR GAAQLRVFNL GNTSPVPVTD LVSILERLLK VKAKRNMMKL PRNGDVPFTH ANISSAQREF
401: GYKPSTDLQT GLKKFVRWYL GYYKQGGKKV AAAA
Arabidopsis Description
GAE2UDP-glucuronate 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC1]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.