Factsheet for TraesCS4D01G224000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G080300.1	Wheat	plastid	97.72	98.54
TraesCS4B01G223700.1	Wheat	plastid	99.38	97.56
EER95171	Sorghum	plastid	92.53	92.92
Zm00001d028427_P001	Maize	plastid	91.91	92.48
HORVU4Hr1G063010.1	Barley	peroxisome	98.13	92.02
Os03t0249500-01	Rice	plastid	92.32	91.94
Zm00001d047915_P001	Maize	plastid	90.66	91.23
VIT_02s0241g00180.t01	Wine grape	cytosol, plastid	35.68	72.88
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	63.69	71.4
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	67.22	70.59
VIT_00s1525g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	60.58	67.13
VIT_00s2240g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	53.73	66.75
PGSC0003DMT400059215	Potato	plastid	30.71	66.37
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	58.51	65.73
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	58.51	65.58
CDX94504	Canola	cytosol, endoplasmic reticulum, peroxisome	59.13	65.52
CDX86716	Canola	cytosol, endoplasmic reticulum, peroxisome	58.92	65.44
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	58.92	65.14
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	58.71	65.06
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	57.88	65.03
CDX97356	Canola	cytosol, endoplasmic reticulum, golgi	57.88	65.03
CDY04398	Canola	cytosol, endoplasmic reticulum, golgi	57.68	64.8
VIT_16s0022g01450.t01	Wine grape	mitochondrion	53.32	62.99
KRH40009	Soybean	plastid	52.9	62.65
TraesCS7D01G154100.1	Wheat	golgi	55.39	61.66
TraesCS6D01G335600.1	Wheat	plastid	55.81	61.42
Solyc08g079440.1.1	Tomato	nucleus	54.98	59.55
PGSC0003DMT400010106	Potato	cytosol, endoplasmic reticulum, golgi, plastid	54.36	58.74
TraesCS7D01G257800.1	Wheat	plastid	56.02	55.1
TraesCS5D01G288700.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	54.98	55.09
TraesCS1D01G451900.1	Wheat	endoplasmic reticulum, golgi	19.09	25.99
TraesCS5D01G321100.1	Wheat	cytosol	19.09	24.93
TraesCS5D01G188200.1	Wheat	plastid	18.88	24.27
TraesCS1D01G315500.1	Wheat	cytosol, mitochondrion, plastid	16.18	21.2
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	17.63	20.99
TraesCS5D01G298700.1	Wheat	mitochondrion	17.84	20.43
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	17.43	20.39
TraesCS5D01G032700.1	Wheat	cytosol, mitochondrion, plastid	18.46	13.34
TraesCS4D01G206000.1	Wheat	mitochondrion	18.46	13.05
TraesCS6D01G238800.1	Wheat	peroxisome	2.28	3.67

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016857
GO:GO:0050662	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574
PANTHER:PTHR43574:SF22	SUPFAM:SSF51735	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G224000	EnsemblPlants:TraesCS4D01G224000.1	SEG:seg

Description

No Description!

Coordinates

chr4D:-:380795812..380797260

Molecular Weight (calculated)

51729.8 Da

IEP (calculated)

10.470

GRAVY (calculated)

-0.191

Length

482 amino acids

Sequence
(BLAST)

001: MAPQLTGAPG SAAAAGGAAA VKPQFHHYHH HRLAPRHHHP PSLLSKLAFW SVCSLSLLLA FLLLAPSSAP APRAAPDAPR RSLHAHPDSA ATWGGAAWEK
101: KVRASARVRR PGGRGGLSVL VTGAAGFVGC HAAAALRRRG DGVLGLDNFN DYYDPALKRG RAALLARSGV YVVDGDIADA ELLAKLFDVA PFTHVLHLAA
201: QAGVRHALVD PMSYVRANVA GLVALLEAAR AADPQPAIVW ASSSSVYGLN SHVPFSEHDR TDRPASLYAA TKKAGEEIAH VYNHIYGLSL TALRFFTVYG
301: PWGRPDMAYF FFTRDILAGR PITVYESSGG GTHQTTISRD FTYIDDIVKG CIGALDTAGR STGSGGKKRG PAPFRTYNLG NTSPVPVTQL VDLLEKMLKV
401: KAVRRVVKMP RNGDVPYTHA NISLAQRELG YRPSTDLQTG LKKFVRWYLE YYNPELAVKQ KQHGSSNGKG SRGRNGSTSS AR

Best Arabidopsis Sequence Match ( AT4G00110.1 )
(BLAST)

001: MKQMSHLDDI PSTPGKFKPY FHRTRWQSSV AKLAFWSLVF VGLIFIFFYR SPVSSNPADP SRRSLRTYSW GGPAWEKRVR SSARLRTRRG FSVLVTGAAG
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISIFE
301: GVNHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIMKLP RNGDVQFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS

Arabidopsis Description

GAE3GAE3 [Source:UniProtKB/TrEMBL;Acc:A0A178V2K1]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.