Factsheet for Bra033116.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, cytosol

Predictor Summary:

nucleus 1
cytosol 2
endoplasmic reticulum 2
golgi 3
extracellular 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97356	Canola	cytosol, endoplasmic reticulum, golgi	98.83	98.83
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	95.57	94.04
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	93.47	92.18
VIT_02s0241g00180.t01	Wine grape	cytosol, plastid	41.72	75.85
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	74.83	74.65
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	74.59	74.59
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	74.36	74.19
VIT_00s2240g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	66.9	73.97
VIT_00s1525g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	74.36	73.33
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	72.73	71.72
PGSC0003DMT400010106	Potato	cytosol, endoplasmic reticulum, golgi, plastid	73.43	70.63
Solyc08g079440.1.1	Tomato	nucleus	72.96	70.34
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	66.2	66.05
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	65.5	65.5
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	64.34	64.19
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	68.3	63.83
Bra014987.1-P	Field mustard	endoplasmic reticulum	65.73	62.11
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	65.73	61.84
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	65.73	61.3
Os03t0249500-01	Rice	plastid	66.43	58.88
TraesCS4A01G080300.1	Wheat	plastid	64.8	58.16
EER95171	Sorghum	plastid	64.8	57.92
TraesCS4D01G224000.1	Wheat	plastid	65.03	57.88
Zm00001d028427_P001	Maize	plastid	64.34	57.62
Zm00001d047915_P001	Maize	plastid	64.34	57.62
TraesCS4B01G223700.1	Wheat	plastid	65.03	56.82
HORVU4Hr1G063010.1	Barley	peroxisome	64.8	54.09
Bra013744.1-P	Field mustard	cytosol, golgi	22.61	27.87
Bra016757.1-P	Field mustard	cytosol	22.38	27.35
Bra027626.1-P	Field mustard	cytosol	22.14	27.07
Bra019785.1-P	Field mustard	cytosol	20.98	26.87
Bra035262.1-P	Field mustard	golgi	21.45	26.51
Bra039253.1-P	Field mustard	cytosol	21.21	26.22
Bra019257.1-P	Field mustard	plastid	21.21	26.15
Bra027732.1-P	Field mustard	golgi	20.75	25.95
Bra033746.1-P	Field mustard	golgi	22.38	23.3
Bra020917.1-P	Field mustard	golgi, mitochondrion	22.14	23.11
Bra027557.1-P	Field mustard	golgi	22.14	23.06
Bra032409.1-P	Field mustard	mitochondrion	22.38	22.91
Bra013466.1-P	Field mustard	mitochondrion	22.14	20.52
Bra005387.1-P	Field mustard	golgi, mitochondrion	21.68	20.48
Bra030933.1-P	Field mustard	cytosol	8.62	20.0
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.91	14.14
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	21.91	13.99
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.68	13.92
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	21.68	13.88
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.45	13.83
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	20.28	13.51
Bra027005.1-P	Field mustard	cytosol	3.26	4.71
Bra019776.1-P	Field mustard	cytosol	3.5	4.67

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra033116	EnsemblPlants:Bra033116.1	EnsemblPlants:Bra033116.1-P
InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	GO:GO:0050662
UniProt:M4EWD2	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574
PANTHER:PTHR43574:SF21	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI00025471DE	SEG:seg	:

Description

AT4G12250 (E=4e-214) GAE5 | GAE5 (UDP-D-GLUCURONATE 4-EPIMERASE 5); UDP-glucuronate 4-epimerase/ catalytic

Coordinates

chrA02:+:16612508..16613797

Molecular Weight (calculated)

47449.5 Da

IEP (calculated)

10.420

GRAVY (calculated)

-0.181

Length

429 amino acids

Sequence
(BLAST)

001: MSHLDDLPST PGKYKVVPYG VLHNHRYLRL SKLTLWASLF LALFLFYLVL SPPASPSRRS LNDSSVKYGG SHWEKQVRKS ARPRSRGGLT VLVTGAAGFV
101: GTHVSIALRR RGDGVLGLDN FNRYYDPKLK RARQGLLERS GVFVVEGDVN DAVLLRKLFD VVLFTHVMHL AAQAGVRYAM QNPGSYVNSN IAGFVNLLEV
201: SKAASPQPAL VWASSSSVYG LNTKVPFSEK DPTDQPASLY AATKKAGEGI AHTYNHIYGL SLTGLRFFTV YGPWGRPDMA YFFFTKDILK GKTITVFESP
301: DKGSVARDFT YIDDIVRGCL GALDTAEKST GSGGKKKGPA MFRIYNLGNT SPVPVTKLVT ILEKLLKMKA KRKIMPLPRN GDVEFTHANI TLAQTEIGYK
401: PEVDLETGLK KFVKWYMGFY TGSKKKSSW

Best Arabidopsis Sequence Match ( AT4G12250.1 )
(BLAST)

001: MSHLDDLPST PGKYKTDKVP PYGILHHHRY LRLSKLTLWA SLFLALFLFY LVLSPPPSPS RRNLNDSSSI SAAKYGGSHW EKQVRKSARP RSHGGLTVLV
101: TGASGFVGTH VSIALRRRGD GVLGLDNFNR YYDPKLKRAR QGLLERSGVF VVEGDINDAV LLRKLFDVVL FTHVMHLAAQ AGVRYAMQNP GSYVNSNIAG
201: FVNLLEVSKS ANPQPAIVWA SSSSVYGLNS KVPFSEKDRT DQPASLYAAT KKAGEGIAHT YNHIYGLSLT GLRFFTVYGP WGRPDMAYFF FTKDILKGKT
301: ITVFESPDKG SVARDFTYID DIVKGCLGAL DTAEKSTGSG GKKKGPAMFR IYNLGNTSPV PVTKLVTILE KLLKMKAKKK IMPLPRNGDV EFTHANITLA
401: QAELGYKPAV DLETGLKKFV KWYMGFYTGS KKKSSW

Arabidopsis Description

GAE5GAE5 [Source:UniProtKB/TrEMBL;Acc:A0A178UUD1]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.