CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
cytosol 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028427_P001	Maize	plastid	98.33	98.54
Zm00001d047915_P001	Maize	plastid	96.67	96.87
TraesCS4A01G080300.1	Wheat	plastid	92.5	92.89
TraesCS4D01G224000.1	Wheat	plastid	92.92	92.53
TraesCS4B01G223700.1	Wheat	plastid	93.12	91.04
Os03t0249500-01	Rice	plastid	91.46	90.7
HORVU4Hr1G063010.1	Barley	peroxisome	91.88	85.8
VIT_02s0241g00180.t01	Wine grape	cytosol, plastid	35.83	72.88
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	63.96	71.4
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	67.92	71.02
VIT_00s1525g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	60.21	66.44
VIT_00s2240g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	53.54	66.24
PGSC0003DMT400059215	Potato	plastid	30.62	65.92
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	58.54	65.5
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	58.54	65.35
CDX94504	Canola	cytosol, endoplasmic reticulum, peroxisome	58.96	65.06
CDX86716	Canola	cytosol, endoplasmic reticulum, peroxisome	58.75	64.98
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	58.96	64.91
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	58.75	64.83
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	57.92	64.8
CDY04398	Canola	cytosol, endoplasmic reticulum, golgi	57.92	64.8
CDX97356	Canola	cytosol, endoplasmic reticulum, golgi	57.71	64.57
VIT_16s0022g01450.t01	Wine grape	mitochondrion	53.54	62.99
KRH40009	Soybean	plastid	53.12	62.65
OQU75981	Sorghum	endoplasmic reticulum	55.83	60.91
EES05940	Sorghum	endoplasmic reticulum, golgi, plastid	55.62	60.82
Solyc08g079440.1.1	Tomato	nucleus	56.25	60.67
PGSC0003DMT400010106	Potato	cytosol, endoplasmic reticulum, golgi, plastid	56.04	60.31
EES14210	Sorghum	cytosol, extracellular, golgi, plastid	55.62	55.74
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	55.42	53.85
KXG36042	Sorghum	cytosol	19.38	25.55
EER98731	Sorghum	plastid	19.38	25.41
EER94859	Sorghum	extracellular, golgi	18.75	25.35
EER95001	Sorghum	mitochondrion	18.54	21.87
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	18.96	21.51
KXG27129	Sorghum	mitochondrion, plastid	18.12	20.96
EER95854	Sorghum	mitochondrion, plastid	17.71	19.77
KXG21627	Sorghum	mitochondrion	19.17	13.41
EER95078	Sorghum	cytosol, mitochondrion, peroxisome	18.75	13.39
EER95086	Sorghum	cytosol, mitochondrion, plastid	18.54	13.24
EES07456	Sorghum	cytosol, peroxisome, plastid	2.71	4.23

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:8054338	UniProt:C5WQX4	EnsemblPlants:EER95171
ProteinID:EER95171	ProteinID:EER95171.1	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016857	GO:GO:0050662	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF01370	PRINTS:PR01713
PANTHER:PTHR43574	PANTHER:PTHR43574:SF22	EnsemblPlantsGene:SORBI_3001G436100	SUPFAM:SSF51735	unigene:Sbi.2111	TMHMM:TMhelix
UniParc:UPI0001A83235	RefSeq:XP_002468173.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:71435489..71437607

Molecular Weight (calculated)

51676.7 Da

IEP (calculated)

10.504

GRAVY (calculated)

-0.189

Length

480 amino acids

Sequence
(BLAST)

001: MAPQLTGAPG SAAASGGAAA VKPQFHHYHH HRLPPRHHHP SPTSLLSKLA FWSVCSLSLL LAFLLLSPAA PAPRAAPESP RRSLHASPSS TASWGGAAWE
101: KKVRASARVR RSMGHSVLVT GAAGFVGCHA AAALRRRGDG VLGLDNFNDY YDTGLKRGRA ALLARSGVYV VDGDIADAEL LAKLFDVVPF THVLHLAAQA
201: GVRHALVDPM SYVRANVAGL VALLEAARAA NPQPAIVWAS SSSVYGLNSH VPFSEHDRTD RPASLYAATK KAGEEIAHVY NHIYGLSLTA LRFFTVYGPW
301: GRPDMAYFFF TRDILAGRPI TVYESAGGGS HQTTISRDFT YIDDIVKGCV AALDTAGRST GSGGKKRGTA PFRTYNLGNT SPVPVTQLVD LLEKLLKVKA
401: VRKVVKMPRN GDVPYTHANV SLAQRELGYR PSTDLQTGLK KFVRWYLEYY HPELAEKQKL RTSSNGKGSR GRNGSSSSAR

Best Arabidopsis Sequence Match ( AT1G02000.1 )
(BLAST)

001: MSHLDDIPST PGKFKMMDKS PFFLHRTRWQ SSVAKLAFWS LVFFGLLFIF FYRSPISNPD SSRRSLRTYS WGGPAWEKRV RSSARVRTRN GVSVLVTGAA
101: GFVGTHVSAA LKRRGDGVLG LDNFNDYYDT SLKRSRQALL ERSGVFIVEG DINDLSLLKK LFEVVPFTHV MHLAAQAGVR YAMENPGSYV HSNIAGFVNL
201: LEVCKSANPQ PAIVWASSSS VYGLNTKVPF SEKDRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP DMAYFFFTRD ILKGKAISIF
301: EGANHGTVAR DFTYIDDIVK GCLGALDTAE KSTGSGGKKR GAAQLRVFNL GNTSPVPVTD LVSILERLLK VKAKRNMMKL PRNGDVPFTH ANISSAQREF
401: GYKPSTDLQT GLKKFVRWYL GYYKQGGKKV AAAA

Arabidopsis Description

GAE2UDP-glucuronate 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC1]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.