CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid

Predictor Summary:

nucleus 1
cytosol 1
endoplasmic reticulum 2
golgi 3
extracellular 1
vacuole 1
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018350_P001	Maize	plasma membrane	97.49	97.49
Os02t0791500-01	Rice	endoplasmic reticulum, golgi, plastid	95.9	96.34
TraesCS6D01G335600.1	Wheat	plastid	94.76	94.98
TraesCS6B01G385900.1	Wheat	plastid	94.76	94.98
TraesCS6A01G353200.1	Wheat	plastid	94.76	94.98
OQU75981	Sorghum	endoplasmic reticulum	89.07	88.86
GSMUA_Achr4P02040_001	Banana	endoplasmic reticulum	76.99	83.66
KRH02967	Soybean	nucleus	81.78	83.29
GSMUA_Achr9P13500_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	78.36	82.89
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	81.32	82.83
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, golgi	76.08	82.47
GSMUA_Achr3P04850_001	Banana	endoplasmic reticulum	77.45	82.13
AT4G30440.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	79.27	81.12
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	79.04	80.89
CDY28188	Canola	cytosol, endoplasmic reticulum, golgi, plastid	79.04	80.89
CDY70926	Canola	cytosol, endoplasmic reticulum, golgi, plastid	79.04	80.89
PGSC0003DMT400020223	Potato	endoplasmic reticulum	79.27	80.74
PGSC0003DMT400029181	Potato	cytosol, golgi, peroxisome	78.13	80.71
Solyc07g006220.1.1	Tomato	nucleus	77.68	80.24
CDX72242	Canola	cytosol, endoplasmic reticulum, golgi, plastid	78.59	80.23
CDY39205	Canola	cytosol, endoplasmic reticulum, golgi, plastid	78.36	80.0
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	77.68	79.3
Solyc12g010540.1.1	Tomato	endoplasmic reticulum	77.9	79.17
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, nucleus	58.77	67.01
GSMUA_Achr7P16250_001	Banana	cytosol, endoplasmic reticulum, golgi	76.77	65.95
EER95171	Sorghum	plastid	60.82	55.62
EES14210	Sorghum	cytosol, extracellular, golgi, plastid	60.59	55.53
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	60.82	54.05
EER94859	Sorghum	extracellular, golgi	20.5	25.35
KXG36042	Sorghum	cytosol	20.96	25.27
EER98731	Sorghum	plastid	20.27	24.32
EER95001	Sorghum	mitochondrion	20.73	22.36
KXG27129	Sorghum	mitochondrion, plastid	20.96	22.17
EER95854	Sorghum	mitochondrion, plastid	20.73	21.16
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	20.05	20.8
EER95078	Sorghum	cytosol, mitochondrion, peroxisome	20.5	13.39
EER95086	Sorghum	cytosol, mitochondrion, plastid	20.27	13.24
KXG21627	Sorghum	mitochondrion	20.27	12.97
EES07456	Sorghum	cytosol, peroxisome, plastid	2.96	4.23

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:8082728	UniProt:C5XUD2	EnsemblPlants:EES05940
ProteinID:EES05940	ProteinID:EES05940.1	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0005975	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016857
GO:GO:0033481	GO:GO:0050378	GO:GO:0050662	GO:GO:0050829	GO:GO:0050832	InterPro:NAD(P)-bd_dom_sf
InterPro:Nuc_sugar_epim	ProteinID:OQU85859.1	ProteinID:OQU85860.1	PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574
PANTHER:PTHR43574:SF17	EnsemblPlantsGene:SORBI_3004G326900	SUPFAM:SSF51735	unigene:Sbi.9488	TMHMM:TMhelix	UniParc:UPI0001A85B16
RefSeq:XP_002452964.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:66173413..66176652

Molecular Weight (calculated)

48092.6 Da

IEP (calculated)

10.027

GRAVY (calculated)

-0.177

Length

439 amino acids

Sequence
(BLAST)

001: MRVLEEDLFP STPGKVKIER AGAMNRQLHR CFASTSTMFL WALFLVAMTA SYLSFQSFVD TSSKYFAASW GGLHWERQIR ASAAPRRPPG SAAGAGMSVL
101: VTGAAGFVGT HCSLALRKRG DGVVGVDNFN AYYDPSLKKA RKALLASHGV FVVEGDINDG RLLAKLFDVV PFTHVLHLAA QAGVRYAMEN PASYVHSNIA
201: GLVTLLEACK DADPQPAIVW ASSSSVYGLN DKVPFSERDR TDQPASLYAA TKKAGEEITH TYNHIYGLSI TGLRFFTVYG PWGRPDMAYF SFTRNILQGK
301: PITVYRGKDH VDLARDFTYI DDIVKGCLGS LDTAGKSTGT GGKKRGPAPY RIFNLGNTSP VTVPNLVSIL EKHLRVKAKK HVVEMPGNGD VPFTHANISL
401: AREQLGYKPS TNLDVGLKKF VKWYLSYYGY TRGSKNSRQ

Best Arabidopsis Sequence Match ( AT4G30440.1 )
(BLAST)

001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH

Arabidopsis Description

GAE1GAE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXF7]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.