Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05940 | Sorghum | endoplasmic reticulum, golgi, plastid | 97.49 | 97.49 |
| Os02t0791500-01 | Rice | endoplasmic reticulum, golgi, plastid | 95.67 | 96.11 |
| TraesCS6D01G335600.1 | Wheat | plastid | 92.94 | 93.15 |
| TraesCS6B01G385900.1 | Wheat | plastid | 92.94 | 93.15 |
| TraesCS6A01G353200.1 | Wheat | plastid | 92.94 | 93.15 |
| Zm00001d037087_P001 | Maize | endoplasmic reticulum | 88.84 | 88.64 |
| Zm00001d045078_P001 | Maize | extracellular, golgi | 80.87 | 85.96 |
| GSMUA_Achr4P02040_001 | Banana | endoplasmic reticulum | 76.54 | 83.17 |
| KRH02967 | Soybean | nucleus | 81.32 | 82.83 |
| KRH72376 | Soybean | endoplasmic reticulum, mitochondrion | 80.87 | 82.37 |
| GSMUA_Achr9P13500_001 | Banana | cytosol, endoplasmic reticulum, golgi, plastid | 77.68 | 82.17 |
| GSMUA_Achr3P04850_001 | Banana | endoplasmic reticulum | 76.77 | 81.4 |
| GSMUA_Achr10P... | Banana | cytosol, endoplasmic reticulum, golgi | 74.94 | 81.23 |
| AT4G30440.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 79.27 | 81.12 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 79.04 | 80.89 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 79.04 | 80.89 |
| Bra011194.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi, plastid | 79.04 | 80.89 |
| PGSC0003DMT400029181 | Potato | cytosol, golgi, peroxisome | 77.68 | 80.24 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 78.36 | 80.0 |
| PGSC0003DMT400020223 | Potato | endoplasmic reticulum | 78.36 | 79.81 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 78.13 | 79.77 |
| Solyc07g006220.1.1 | Tomato | nucleus | 77.22 | 79.76 |
| Bra024075.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi, plastid | 77.45 | 79.07 |
| Solyc12g010540.1.1 | Tomato | endoplasmic reticulum | 77.22 | 78.47 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi, nucleus | 57.4 | 65.45 |
| GSMUA_Achr7P16250_001 | Banana | cytosol, endoplasmic reticulum, golgi | 75.63 | 64.97 |
| Zm00001d049804_P001 | Maize | plasma membrane | 59.0 | 57.81 |
| Zm00001d031577_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome, plastid | 57.63 | 56.22 |
| Zm00001d028427_P001 | Maize | plastid | 59.91 | 54.91 |
| Zm00001d021026_P001 | Maize | endoplasmic reticulum | 60.14 | 54.21 |
| Zm00001d047915_P001 | Maize | plastid | 58.77 | 53.86 |
| Zm00001d034293_P001 | Maize | plastid | 25.51 | 50.68 |
| Zm00001d037310_P001 | Maize | plastid | 30.3 | 43.75 |
| Zm00001d038116_P001 | Maize | plastid | 28.47 | 38.58 |
| Zm00001d017794_P001 | Maize | plastid | 29.84 | 35.12 |
| Zm00001d029151_P002 | Maize | extracellular, golgi | 20.5 | 25.35 |
| Zm00001d005598_P001 | Maize | plastid | 20.96 | 25.21 |
| Zm00001d021249_P003 | Maize | cytosol | 20.73 | 25.07 |
| Zm00001d028825_P001 | Maize | golgi, mitochondrion | 21.18 | 22.04 |
| Zm00001d047683_P003 | Maize | mitochondrion | 20.96 | 21.7 |
| Zm00001d020093_P002 | Maize | golgi | 14.58 | 21.19 |
| Zm00001d032346_P002 | Maize | endoplasmic reticulum, golgi, plastid | 20.27 | 21.04 |
| Zm00001d026311_P001 | Maize | golgi, mitochondrion, plastid | 20.73 | 18.02 |
| Zm00001d002292_P004 | Maize | endoplasmic reticulum, golgi | 17.54 | 16.92 |
| Zm00001d047796_P003 | Maize | extracellular, nucleus, plasma membrane | 20.5 | 13.39 |
| Zm00001d028654_P002 | Maize | cytosol | 20.05 | 13.1 |
| Zm00001d037784_P002 | Maize | endoplasmic reticulum | 20.5 | 12.93 |
| Zm00001d010657_P001 | Maize | golgi, plastid, vacuole | 8.88 | 11.27 |
| Zm00001d017999_P002 | Maize | mitochondrion | 7.97 | 11.25 |
| Zm00001d014509_P001 | Maize | cytosol | 6.83 | 10.45 |
| Zm00001d017601_P001 | Maize | extracellular, peroxisome | 2.96 | 4.23 |
Protein Annotations
| EntrezGene:100274751 | MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | ProteinID:AQK75695.1 | UniProt:B6SI92 |
| EMBL:BT062387 | EMBL:EU952457 | InterPro:Epimerase_deHydtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016857 | GO:GO:0050662 | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim | PFAM:PF01370 | PRINTS:PR01713 |
| PANTHER:PTHR43574 | PANTHER:PTHR43574:SF17 | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI000182B81B | EnsemblPlantsGene:Zm00001d018350 |
| EnsemblPlants:Zm00001d018350_P001 | EnsemblPlants:Zm00001d018350_T001 | SEG:seg | : | : | : |
Description
UDP-glucuronate 4-epimerase 1
Coordinates
chr5:+:219015403..219016722
Molecular Weight (calculated)
48121.7 Da
IEP (calculated)
10.181
GRAVY (calculated)
-0.190
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVLEEDLFP STPGKVKIER AGAMNRQLHR CFASTSTMFL WALFLVAMTA SYLSFQSFVD TSSKYLAASW GGLHWERQIR ASAAPRRPPG SAAGAGMSVL
101: VTGAAGFVGT HCSLALRKRG DGVVGVDNFN AYYDPSLKKA RRALLASHGV FIVEGDINDG RLLAKLFDVV PFTHVLHLAA QAGVRYAMQN PASYVHSNIA
201: GLVTLLEACK DADPQPAIVW ASSSSVYGLN DKVPFSERDR TDQPASLYAA TKKAGEEITH TYNHIYGLSI TGLRFFTVYG PWGRPDMAYF SFTRNILQGK
301: PITVYRGKDR VDLARDFTYI DDIVKGCLGS LDTAGKSTGT GGKKRGPAPY RIFNLGNTAP VTVPNLVSIL EKHLRVKAKK NVVEMPGNGD VPFTHANITL
401: ARQQLGYKPT TNLDVGLKKF VKWYQSYYGY TRGSKNSRQ
101: VTGAAGFVGT HCSLALRKRG DGVVGVDNFN AYYDPSLKKA RRALLASHGV FIVEGDINDG RLLAKLFDVV PFTHVLHLAA QAGVRYAMQN PASYVHSNIA
201: GLVTLLEACK DADPQPAIVW ASSSSVYGLN DKVPFSERDR TDQPASLYAA TKKAGEEITH TYNHIYGLSI TGLRFFTVYG PWGRPDMAYF SFTRNILQGK
301: PITVYRGKDR VDLARDFTYI DDIVKGCLGS LDTAGKSTGT GGKKRGPAPY RIFNLGNTAP VTVPNLVSIL EKHLRVKAKK NVVEMPGNGD VPFTHANITL
401: ARQQLGYKPT TNLDVGLKKF VKWYQSYYGY TRGSKNSRQ
001: MPSIEDELFP STPGKFKIDR SNRQLHRCFA STSTMFLWAL FLIALTASYL SFQSFVDSGS RYLTASWGGI QWEKQVRTSA QIHRSGGISV LVTGATGFVG
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH
101: SHVSLALRKR GDGVVGLDNF NNYYDPSLKR ARRSLLSSRG IFVVEGDLND AKLLAKLFDV VAFTHVMHLA AQAGVRYALE NPQSYVHSNI AGLVNLLEIC
201: KAANPQPAIV WASSSSVYGL NEKVPFSESD RTDQPASLYA ATKKAGEEIT HTYNHIYGLA ITGLRFFTVY GPWGRPDMAY FSFTRNILQG KPITIYRGKN
301: RVDLARDFTY IDDIVKGCLG SLDSSGKSTG SGGKKRGAAP YRIFNLGNTS PVTVPILVDI LEKHLKVKAK RNFVEMPGNG DVPFTHANIS SARNEFGYKP
401: TTDLETGLKK FVRWYLSYYG YNTKAKLVH
Arabidopsis Description
GAE1GAE1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXF7]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.